Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 AC073912.3-201ENST00000624414 853 ntBASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 RPS2P55-201ENST00000397318 883 ntBASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 KRASP1-201ENST00000407852 552 ntBASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 AC107956.1-201ENST00000494359 873 ntBASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HCFC1R1Q9NWW0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 AC133681.1-201ENST00000465482 601 ntBASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 AC233702.5-201ENST00000584107 538 ntBASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.3■■□□□ 1
HCFC1R1Q9NWW0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 AL390719.1-204ENST00000412397 1219 ntBASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 AC012618.2-201ENST00000428058 849 ntBASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.29■■□□□ 1
HCFC1R1Q9NWW0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.28■■□□□ 1
HCFC1R1Q9NWW0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 AC211429.1-201ENST00000415277 523 ntBASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 REXO1L12P-201ENST00000622156 912 ntBASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms