Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC100791.3-201ENST00000617619 330 ntBASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
BLOC1S4Q9NUP1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.77■■□□□ 1.23
BLOC1S4Q9NUP1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 OR10C1-204ENST00000622521 1039 ntBASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BLOC1S4Q9NUP1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 MCRIP2P1-201ENST00000394346 511 ntBASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 AC069236.1-201ENST00000604339 616 ntBASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 AL356652.1-201ENST00000615962 565 ntBASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 AL162377.1-201ENST00000618844 1793 ntBASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 AL512408.1-201ENST00000569378 2000 ntBASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
BLOC1S4Q9NUP1 AC092720.2-201ENST00000602388 1665 ntBASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 AC010980.2-201ENST00000587099 1412 ntBASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 MIR663A-201ENST00000385250 93 ntBASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 AL355472.2-201ENST00000422958 438 ntBASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 AC133552.2-202ENST00000575694 574 ntBASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
BLOC1S4Q9NUP1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 AL512625.2-201ENST00000417533 625 ntBASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms