Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 MIR2861-201ENST00000636310 90 ntBASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC3Q9NUD5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 KRT18P5-201ENST00000436075 1291 ntBASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 CDV3P1-201ENST00000471403 739 ntBASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 RARRES2P6-201ENST00000567333 442 ntBASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 AC092720.2-201ENST00000602388 1665 ntBASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC3Q9NUD5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 SLC25A24-204ENST00000569674 2357 ntBASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 AC137761.2-201ENST00000561729 223 ntBASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 AC145350.3-201ENST00000569033 163 ntBASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC3Q9NUD5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
ZCCHC3Q9NUD5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.14■□□□□ 0.66
ZCCHC3Q9NUD5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZCCHC3Q9NUD5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 AC026271.2-201ENST00000428091 497 ntBASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 KRT18P11-201ENST00000435214 1283 ntBASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 AC010536.3-201ENST00000620306 533 ntBASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC3Q9NUD5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 TERF1P5-201ENST00000477545 1207 ntBASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms