Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 CCDC92B-201ENST00000575506 885 ntBASIC18.41■□□□□ 0.54
HINT3Q9NQE9 RARRES2P11-201ENST00000635158 484 ntBASIC18.41■□□□□ 0.54
HINT3Q9NQE9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HINT3Q9NQE9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 POU5F1P4-201ENST00000413175 1085 ntBASIC18.4■□□□□ 0.54
HINT3Q9NQE9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 AC008175.2-201ENST00000612840 297 ntBASIC18.4■□□□□ 0.54
HINT3Q9NQE9 TCF3P1-201ENST00000423021 1937 ntBASIC18.4■□□□□ 0.54
HINT3Q9NQE9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
HINT3Q9NQE9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HINT3Q9NQE9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 TERF1P2-201ENST00000583350 1212 ntBASIC18.39■□□□□ 0.53
HINT3Q9NQE9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HINT3Q9NQE9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 KRT18P14-201ENST00000534205 1250 ntBASIC18.38■□□□□ 0.53
HINT3Q9NQE9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HINT3Q9NQE9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 AL162430.1-201ENST00000480705 870 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4L2-201ENST00000561772 1275 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4L6-201ENST00000626483 1275 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4L1-201ENST00000627662 1275 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4L8-201ENST00000629013 1275 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4L3-201ENST00000630187 1275 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DUX4L7-201ENST00000630678 1275 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms