Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 MYC-209ENST00000641252 345 ntBASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 AC121338.2-201ENST00000622535 1744 ntBASIC20.56■□□□□ 0.88
PCDH12Q9NPG4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 KRT18P6-201ENST00000555540 1265 ntBASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 AC083880.1-201ENST00000608266 535 ntBASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH12Q9NPG4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 AC087633.2-202ENST00000565166 1439 ntBASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 AC097658.1-201ENST00000475555 843 ntBASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH12Q9NPG4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 CD99P1-205ENST00000527459 561 ntBASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH12Q9NPG4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 AC105020.6-201ENST00000621523 1217 ntBASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PCDH12Q9NPG4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PCDH12Q9NPG4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH12Q9NPG4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH12Q9NPG4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH12Q9NPG4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 RNF165-205ENST00000588679 2904 ntBASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH12Q9NPG4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms