Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD8Q9HCK8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 PCED1CP-201ENST00000419887 785 ntBASIC19.22■□□□□ 0.67
CHD8Q9HCK8 AC117947.1-201ENST00000427448 529 ntBASIC19.22■□□□□ 0.67
CHD8Q9HCK8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD8Q9HCK8 AC026271.3-201ENST00000571884 352 ntBASIC19.22■□□□□ 0.67
CHD8Q9HCK8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 C11orf96-202ENST00000528572 1834 ntBASIC19.21■□□□□ 0.67
CHD8Q9HCK8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 AC007322.3-201ENST00000426526 701 ntBASIC19.21■□□□□ 0.67
CHD8Q9HCK8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD8Q9HCK8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
CHD8Q9HCK8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 AC003102.1-202ENST00000563394 1796 ntBASIC19.2■□□□□ 0.66
CHD8Q9HCK8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 TSPY14P-201ENST00000303979 915 ntBASIC19.2■□□□□ 0.66
CHD8Q9HCK8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD8Q9HCK8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AC128688.1-201ENST00000487626 519 ntBASIC19.19■□□□□ 0.66
CHD8Q9HCK8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 LINC02084-201ENST00000606069 1096 ntBASIC19.19■□□□□ 0.66
CHD8Q9HCK8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AC069148.1-201ENST00000608741 768 ntBASIC19.19■□□□□ 0.66
CHD8Q9HCK8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD8Q9HCK8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 FAM86EP-206ENST00000510506 987 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 AP005242.2-201ENST00000580065 1175 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms