Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.93■□□□□ 0.46
VRK1Q99986 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.93■□□□□ 0.46
VRK1Q99986 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.93■□□□□ 0.46
VRK1Q99986 SLC7A5P1-201ENST00000568957 537 ntBASIC17.93■□□□□ 0.46
VRK1Q99986 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.93■□□□□ 0.46
VRK1Q99986 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.93■□□□□ 0.46
VRK1Q99986 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.93■□□□□ 0.46
VRK1Q99986 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VRK1Q99986 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.93■□□□□ 0.46
VRK1Q99986 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VRK1Q99986 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VRK1Q99986 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VRK1Q99986 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.92■□□□□ 0.46
VRK1Q99986 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
VRK1Q99986 CNN2P6-201ENST00000439038 900 ntBASIC17.92■□□□□ 0.46
VRK1Q99986 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.92■□□□□ 0.46
VRK1Q99986 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.92■□□□□ 0.46
VRK1Q99986 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.92■□□□□ 0.46
VRK1Q99986 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VRK1Q99986 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VRK1Q99986 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 Z98882.1-201ENST00000622160 2253 ntBASIC17.91■□□□□ 0.46
VRK1Q99986 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.91■□□□□ 0.46
VRK1Q99986 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.91■□□□□ 0.46
VRK1Q99986 AF201337.1-201ENST00000520239 748 ntBASIC17.91■□□□□ 0.46
VRK1Q99986 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.91■□□□□ 0.46
VRK1Q99986 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.91■□□□□ 0.46
VRK1Q99986 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VRK1Q99986 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 FEM1AP4-201ENST00000443167 1987 ntBASIC17.91■□□□□ 0.46
VRK1Q99986 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VRK1Q99986 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.91■□□□□ 0.46
VRK1Q99986 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VRK1Q99986 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.9■□□□□ 0.46
VRK1Q99986 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.9■□□□□ 0.46
VRK1Q99986 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VRK1Q99986 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VRK1Q99986 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VRK1Q99986 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VRK1Q99986 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VRK1Q99986 AC105036.2-201ENST00000569468 176 ntBASIC17.9■□□□□ 0.46
VRK1Q99986 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VRK1Q99986 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VRK1Q99986 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VRK1Q99986 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.89■□□□□ 0.45
VRK1Q99986 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.89■□□□□ 0.45
VRK1Q99986 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.89■□□□□ 0.45
VRK1Q99986 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 TSPY6P-201ENST00000448518 926 ntBASIC17.89■□□□□ 0.45
VRK1Q99986 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.89■□□□□ 0.45
VRK1Q99986 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VRK1Q99986 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.89■□□□□ 0.45
VRK1Q99986 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VRK1Q99986 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.89■□□□□ 0.45
VRK1Q99986 AC008694.1-202ENST00000636953 945 ntBASIC17.89■□□□□ 0.45
VRK1Q99986 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.89■□□□□ 0.45
VRK1Q99986 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.89■□□□□ 0.45
VRK1Q99986 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VRK1Q99986 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms