Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17■□□□□ 0.31
GAFA1Q96PS6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17■□□□□ 0.31
GAFA1Q96PS6 GPX1P1-201ENST00000388829 606 ntBASIC17■□□□□ 0.31
GAFA1Q96PS6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17■□□□□ 0.31
GAFA1Q96PS6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17■□□□□ 0.31
GAFA1Q96PS6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
GAFA1Q96PS6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17■□□□□ 0.31
GAFA1Q96PS6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17■□□□□ 0.31
GAFA1Q96PS6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GAFA1Q96PS6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 KRT18P68-201ENST00000392293 1000 ntBASIC16.99■□□□□ 0.31
GAFA1Q96PS6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 GUSBP6-202ENST00000438529 1198 ntBASIC16.99■□□□□ 0.31
GAFA1Q96PS6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.99■□□□□ 0.31
GAFA1Q96PS6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 AC105020.6-201ENST00000621523 1217 ntBASIC16.98■□□□□ 0.31
GAFA1Q96PS6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GAFA1Q96PS6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 KRT17P1-201ENST00000399211 1546 ntBASIC16.97■□□□□ 0.31
GAFA1Q96PS6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 SLC29A4P1-201ENST00000398760 971 ntBASIC16.97■□□□□ 0.31
GAFA1Q96PS6 TSPY6P-201ENST00000448518 926 ntBASIC16.97■□□□□ 0.31
GAFA1Q96PS6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAFA1Q96PS6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 BX276092.2-201ENST00000417668 665 ntBASIC16.96■□□□□ 0.31
GAFA1Q96PS6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GAFA1Q96PS6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms