Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP53Q96M91 NME6-213ENST00000451657 871 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP53Q96M91 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP53Q96M91 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 KRT8P36-201ENST00000489121 1440 ntBASIC27.34■■□□□ 1.97
CFAP53Q96M91 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP53Q96M91 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP53Q96M91 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP53Q96M91 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 KRT18P6-201ENST00000555540 1265 ntBASIC27.34■■□□□ 1.97
CFAP53Q96M91 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP53Q96M91 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP53Q96M91 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP53Q96M91 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CFAP53Q96M91 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP53Q96M91 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC27.33■■□□□ 1.97
CFAP53Q96M91 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.33■■□□□ 1.97
CFAP53Q96M91 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP53Q96M91 PALM-208ENST00000592155 2272 ntTSL 4 BASIC27.33■■□□□ 1.97
CFAP53Q96M91 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP53Q96M91 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP53Q96M91 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
CFAP53Q96M91 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP53Q96M91 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
CFAP53Q96M91 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP53Q96M91 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP53Q96M91 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.32■■□□□ 1.96
CFAP53Q96M91 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP53Q96M91 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP53Q96M91 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 C2orf69P4-201ENST00000565394 541 ntBASIC27.31■■□□□ 1.96
CFAP53Q96M91 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CFAP53Q96M91 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP53Q96M91 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP53Q96M91 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.3■■□□□ 1.96
CFAP53Q96M91 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP53Q96M91 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP53Q96M91 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP53Q96M91 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFAP53Q96M91 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
CFAP53Q96M91 AL137060.1-201ENST00000618151 2648 ntBASIC27.28■■□□□ 1.96
CFAP53Q96M91 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC27.28■■□□□ 1.96
CFAP53Q96M91 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 FP700111.2-201ENST00000619190 1892 ntBASIC27.28■■□□□ 1.96
CFAP53Q96M91 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CFAP53Q96M91 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
CFAP53Q96M91 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CFAP53Q96M91 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP53Q96M91 CD99P1-205ENST00000527459 561 ntBASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms