Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 RNA5SP413-201ENST00000516373 109 ntBASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 C2orf69P4-201ENST00000565394 541 ntBASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCD1Q96GM5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCD1Q96GM5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCD1Q96GM5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 PKD1P6-201ENST00000343738 4769 ntBASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 KRT8P36-201ENST00000489121 1440 ntBASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCD1Q96GM5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCD1Q96GM5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
SMARCD1Q96GM5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMARCD1Q96GM5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 HLA-B-256ENST00000639848 1089 ntBASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.47■■□□□ 1.03
SMARCD1Q96GM5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.46■■□□□ 1.03
SMARCD1Q96GM5 AC060766.5-201ENST00000590539 871 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms