Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC97Q96F63 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC97Q96F63 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC97Q96F63 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC97Q96F63 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC97Q96F63 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC97Q96F63 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC97Q96F63 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC97Q96F63 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC97Q96F63 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC97Q96F63 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC97Q96F63 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC97Q96F63 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC97Q96F63 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.7■□□□□ 0.9
CCDC97Q96F63 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC97Q96F63 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 AL121832.2-201ENST00000610979 668 ntBASIC20.7■□□□□ 0.9
CCDC97Q96F63 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.7■□□□□ 0.9
CCDC97Q96F63 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC97Q96F63 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC97Q96F63 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC97Q96F63 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC97Q96F63 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 AC008175.2-201ENST00000612840 297 ntBASIC20.69■□□□□ 0.9
CCDC97Q96F63 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC97Q96F63 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC97Q96F63 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 AC142086.2-201ENST00000569753 217 ntBASIC20.68■□□□□ 0.9
CCDC97Q96F63 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 AC231657.2-201ENST00000624556 255 ntBASIC20.68■□□□□ 0.9
CCDC97Q96F63 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC97Q96F63 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC97Q96F63 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 POU5F1P4-201ENST00000413175 1085 ntBASIC20.67■□□□□ 0.9
CCDC97Q96F63 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms