Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRIM11Q96F44 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM11Q96F44 AL512408.1-201ENST00000569378 2000 ntBASIC21.58■■□□□ 1.05
TRIM11Q96F44 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM11Q96F44 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM11Q96F44 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM11Q96F44 KRT18P11-201ENST00000435214 1283 ntBASIC21.58■■□□□ 1.05
TRIM11Q96F44 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM11Q96F44 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
TRIM11Q96F44 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TRIM11Q96F44 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.58■■□□□ 1.04
TRIM11Q96F44 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM11Q96F44 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TRIM11Q96F44 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM11Q96F44 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM11Q96F44 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM11Q96F44 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 AC010536.3-201ENST00000620306 533 ntBASIC21.57■■□□□ 1.04
TRIM11Q96F44 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM11Q96F44 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM11Q96F44 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 KRT8P36-201ENST00000489121 1440 ntBASIC21.56■■□□□ 1.04
TRIM11Q96F44 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 PGM5P4-201ENST00000421970 445 ntBASIC21.56■■□□□ 1.04
TRIM11Q96F44 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM11Q96F44 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM11Q96F44 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 TERF1P5-201ENST00000477545 1207 ntBASIC21.55■■□□□ 1.04
TRIM11Q96F44 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM11Q96F44 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRIM11Q96F44 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 AL591742.1-201ENST00000604433 565 ntBASIC21.54■■□□□ 1.04
TRIM11Q96F44 AC087623.3-201ENST00000607047 1098 ntBASIC21.54■■□□□ 1.04
TRIM11Q96F44 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM11Q96F44 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM11Q96F44 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms