Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DDX1Q92499 AL512408.1-201ENST00000569378 2000 ntBASIC21.78■■□□□ 1.08
DDX1Q92499 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DDX1Q92499 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
DDX1Q92499 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
DDX1Q92499 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX1Q92499 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX1Q92499 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 CNN2P6-201ENST00000439038 900 ntBASIC21.77■■□□□ 1.08
DDX1Q92499 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX1Q92499 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
DDX1Q92499 AL591742.1-201ENST00000604433 565 ntBASIC21.77■■□□□ 1.08
DDX1Q92499 AL121832.2-201ENST00000610979 668 ntBASIC21.77■■□□□ 1.08
DDX1Q92499 AC011767.1-201ENST00000617410 1153 ntBASIC21.77■■□□□ 1.08
DDX1Q92499 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
DDX1Q92499 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX1Q92499 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX1Q92499 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX1Q92499 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX1Q92499 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.77■■□□□ 1.07
DDX1Q92499 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX1Q92499 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX1Q92499 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
DDX1Q92499 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
DDX1Q92499 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX1Q92499 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX1Q92499 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.76■■□□□ 1.07
DDX1Q92499 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.76■■□□□ 1.07
DDX1Q92499 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 CDV3P1-201ENST00000471403 739 ntBASIC21.76■■□□□ 1.07
DDX1Q92499 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.76■■□□□ 1.07
DDX1Q92499 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.76■■□□□ 1.07
DDX1Q92499 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
DDX1Q92499 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX1Q92499 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.75■■□□□ 1.07
DDX1Q92499 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.75■■□□□ 1.07
DDX1Q92499 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 AC016405.3-201ENST00000607710 860 ntBASIC21.75■■□□□ 1.07
DDX1Q92499 FAM21FP-204ENST00000608637 956 ntBASIC21.75■■□□□ 1.07
DDX1Q92499 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX1Q92499 AC013268.1-206ENST00000638368 961 ntBASIC21.75■■□□□ 1.07
DDX1Q92499 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX1Q92499 AC112229.1-201ENST00000639295 961 ntBASIC21.75■■□□□ 1.07
DDX1Q92499 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX1Q92499 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX1Q92499 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX1Q92499 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 AL162412.1-201ENST00000567129 965 ntBASIC21.74■■□□□ 1.07
DDX1Q92499 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
DDX1Q92499 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX1Q92499 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX1Q92499 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
DDX1Q92499 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms