Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 MIR2861-201ENST00000636310 90 ntBASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 AC007952.6-201ENST00000573168 2673 ntBASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 AC003957.1-201ENST00000625108 2673 ntBASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATG4AQ8WYN0 AC004854.2-201ENST00000608450 1441 ntBASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 CCDC92B-201ENST00000575506 885 ntBASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATG4AQ8WYN0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 TCF3P1-201ENST00000423021 1937 ntBASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 AC123595.1-201ENST00000440769 1046 ntBASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 YBX1P1-201ENST00000445822 960 ntBASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.12■□□□□ 0.97
ATG4AQ8WYN0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATG4AQ8WYN0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATG4AQ8WYN0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATG4AQ8WYN0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATG4AQ8WYN0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATG4AQ8WYN0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATG4AQ8WYN0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
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