Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 AL162377.1-201ENST00000618844 1793 ntBASIC13.82□□□□□ -0.2
COPS9Q8WXC6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 AL031602.1-201ENST00000633169 911 ntBASIC13.82□□□□□ -0.2
COPS9Q8WXC6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS9Q8WXC6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 ABHD17AP4-201ENST00000411545 909 ntBASIC13.81□□□□□ -0.2
COPS9Q8WXC6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS9Q8WXC6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 MIR639-201ENST00000384974 98 ntBASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 MIR6722-201ENST00000617286 78 ntBASIC13.8□□□□□ -0.2
COPS9Q8WXC6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.8□□□□□ -0.2
COPS9Q8WXC6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS9Q8WXC6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 OR6D1P-203ENST00000641209 4860 ntBASIC13.79□□□□□ -0.2
COPS9Q8WXC6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS9Q8WXC6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms