Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SNED1Q8TER0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SNED1Q8TER0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SNED1Q8TER0 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.07■■□□□ 1.6
SNED1Q8TER0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.07■■□□□ 1.6
SNED1Q8TER0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.07■■□□□ 1.6
SNED1Q8TER0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
SNED1Q8TER0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.07■■□□□ 1.6
SNED1Q8TER0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SNED1Q8TER0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.07■■□□□ 1.6
SNED1Q8TER0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNED1Q8TER0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SNED1Q8TER0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNED1Q8TER0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNED1Q8TER0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 AC026471.5-201ENST00000615068 467 ntBASIC25.06■■□□□ 1.6
SNED1Q8TER0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNED1Q8TER0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SNED1Q8TER0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SNED1Q8TER0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.05■■□□□ 1.6
SNED1Q8TER0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.05■■□□□ 1.6
SNED1Q8TER0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNED1Q8TER0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.04■■□□□ 1.6
SNED1Q8TER0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNED1Q8TER0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 KRT18P35-201ENST00000510488 1269 ntBASIC25.03■■□□□ 1.6
SNED1Q8TER0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.03■■□□□ 1.6
SNED1Q8TER0 AP003071.4-201ENST00000562276 1284 ntBASIC25.03■■□□□ 1.6
SNED1Q8TER0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.03■■□□□ 1.6
SNED1Q8TER0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.03■■□□□ 1.6
SNED1Q8TER0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
SNED1Q8TER0 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.03■■□□□ 1.6
SNED1Q8TER0 TMPOP1-202ENST00000424642 1267 ntBASIC25.03■■□□□ 1.6
SNED1Q8TER0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.03■■□□□ 1.6
SNED1Q8TER0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.03■■□□□ 1.6
SNED1Q8TER0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNED1Q8TER0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNED1Q8TER0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNED1Q8TER0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNED1Q8TER0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SNED1Q8TER0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNED1Q8TER0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.02■■□□□ 1.6
SNED1Q8TER0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SNED1Q8TER0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.01■■□□□ 1.59
SNED1Q8TER0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
SNED1Q8TER0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNED1Q8TER0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNED1Q8TER0 PGM5P4-201ENST00000421970 445 ntBASIC25.01■■□□□ 1.59
SNED1Q8TER0 AF186192.3-201ENST00000583427 947 ntBASIC25.01■■□□□ 1.59
SNED1Q8TER0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SNED1Q8TER0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SNED1Q8TER0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25■■□□□ 1.59
SNED1Q8TER0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SNED1Q8TER0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms