Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 AC133041.1-202ENST00000642053 222 ntBASIC20.75■□□□□ 0.91
CHD5Q8TDI0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD5Q8TDI0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.74■□□□□ 0.91
CHD5Q8TDI0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 UNC93B5-201ENST00000530315 699 ntBASIC20.74■□□□□ 0.91
CHD5Q8TDI0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 AC060766.5-201ENST00000590539 871 ntBASIC20.74■□□□□ 0.91
CHD5Q8TDI0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD5Q8TDI0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 AC073314.1-201ENST00000568729 2216 ntBASIC20.73■□□□□ 0.91
CHD5Q8TDI0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD5Q8TDI0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 LSM12P1-201ENST00000411836 588 ntBASIC20.72■□□□□ 0.91
CHD5Q8TDI0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD5Q8TDI0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 AC097658.1-201ENST00000475555 843 ntBASIC20.71■□□□□ 0.91
CHD5Q8TDI0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD5Q8TDI0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 MIR4651-201ENST00000582622 73 ntBASIC20.7■□□□□ 0.9
CHD5Q8TDI0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD5Q8TDI0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms