Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 RBM17P2-201ENST00000616397 1405 ntBASIC19.18■□□□□ 0.66
PSD4Q8NDX1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 CYP2T1P-201ENST00000432607 1285 ntBASIC19.18■□□□□ 0.66
PSD4Q8NDX1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 AC133552.2-202ENST00000575694 574 ntBASIC19.18■□□□□ 0.66
PSD4Q8NDX1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PSD4Q8NDX1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 TSPY6P-201ENST00000448518 926 ntBASIC19.17■□□□□ 0.66
PSD4Q8NDX1 AF201337.1-201ENST00000520239 748 ntBASIC19.17■□□□□ 0.66
PSD4Q8NDX1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 AC243732.1-201ENST00000612648 864 ntBASIC19.17■□□□□ 0.66
PSD4Q8NDX1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.17■□□□□ 0.66
PSD4Q8NDX1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 SLC29A4P1-201ENST00000398760 971 ntBASIC19.16■□□□□ 0.66
PSD4Q8NDX1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSD4Q8NDX1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 AC105036.2-201ENST00000569468 176 ntBASIC19.15■□□□□ 0.66
PSD4Q8NDX1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PSD4Q8NDX1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PSD4Q8NDX1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PSD4Q8NDX1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.66
PSD4Q8NDX1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 GUSBP6-202ENST00000438529 1198 ntBASIC19.14■□□□□ 0.65
PSD4Q8NDX1 AC069236.1-201ENST00000604339 616 ntBASIC19.14■□□□□ 0.65
PSD4Q8NDX1 AC008694.1-202ENST00000636953 945 ntBASIC19.14■□□□□ 0.65
PSD4Q8NDX1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms