Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNEP1R1Q8N9A8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 AC060766.5-201ENST00000590539 871 ntBASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 ITM2C-210ENST00000620962 501 ntBASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 AC092368.3-202ENST00000574180 1591 ntBASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNEP1R1Q8N9A8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 AC011484.1-201ENST00000377652 1995 ntBASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 UNC93B5-201ENST00000530315 699 ntBASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 AC006058.3-201ENST00000606217 1069 ntBASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 HLA-B-256ENST00000639848 1089 ntBASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNEP1R1Q8N9A8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 AP003097.1-201ENST00000530657 1135 ntBASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 AL356652.1-201ENST00000615962 565 ntBASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNEP1R1Q8N9A8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms