Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DUSP5P2-201ENST00000426873 1033 ntBASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 AC091874.3-201ENST00000512672 1195 ntBASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 AC098934.4-201ENST00000564127 592 ntBASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAM1L1Q8N609 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 MYC-209ENST00000641252 345 ntBASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAM1L1Q8N609 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 AC097658.1-201ENST00000475555 843 ntBASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 AL121603.2-201ENST00000557373 2117 ntBASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAM1L1Q8N609 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAM1L1Q8N609 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 C2orf69P4-201ENST00000565394 541 ntBASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAM1L1Q8N609 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms