Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 RN7SL850P-201ENST00000579959 291 ntBASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 KRT18P21-201ENST00000515767 1272 ntBASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 MIR2861-201ENST00000636310 90 ntBASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL27A1Q8IZC6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 NUDT16P1-203ENST00000513809 620 ntBASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 AL353708.3-201ENST00000610272 989 ntBASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL27A1Q8IZC6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 KRT17P2-201ENST00000300992 1314 ntBASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 AC133561.5-201ENST00000635547 218 ntBASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 AC124283.5-201ENST00000624661 1809 ntBASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
COL27A1Q8IZC6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL27A1Q8IZC6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 PRKY-204ENST00000533551 1019 ntBASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
COL27A1Q8IZC6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 GUSBP5-202ENST00000510805 1989 ntBASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms