Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 AC007225.1-201ENST00000566331 1836 ntBASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf40Q8IXQ3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf40Q8IXQ3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 AC083880.1-201ENST00000608266 535 ntBASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf40Q8IXQ3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 AC097658.1-201ENST00000475555 843 ntBASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.85■□□□□ 0.61
C9orf40Q8IXQ3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
C9orf40Q8IXQ3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf40Q8IXQ3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.83■□□□□ 0.61
C9orf40Q8IXQ3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf40Q8IXQ3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.83■□□□□ 0.61
C9orf40Q8IXQ3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf40Q8IXQ3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms