Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 MCRIP2P1-201ENST00000394346 511 ntBASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 KRT17P3-201ENST00000420566 1262 ntBASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 PNMA6B-201ENST00000538162 1200 ntBASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 AC092368.3-202ENST00000574180 1591 ntBASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 AF106564.1-201ENST00000607058 2553 ntBASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SBSPONQ8IVN8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 MIR718-201ENST00000390190 70 ntBASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 AL391422.3-201ENST00000603791 2761 ntBASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SBSPONQ8IVN8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 AC010542.4-201ENST00000563151 1910 ntBASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 KRT18P68-201ENST00000392293 1000 ntBASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SBSPONQ8IVN8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SBSPONQ8IVN8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 AC007952.6-201ENST00000573168 2673 ntBASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 AC003957.1-201ENST00000625108 2673 ntBASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 RN7SL471P-201ENST00000580476 299 ntBASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 MIR4497-201ENST00000583208 89 ntBASIC15.14■□□□□ 0.01
SBSPONQ8IVN8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms