Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
RAI1Q7Z5J4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAI1Q7Z5J4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAI1Q7Z5J4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.52■□□□□ 0.39
RAI1Q7Z5J4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 AC133681.1-201ENST00000465482 601 ntBASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 MTDHP1-201ENST00000605323 784 ntBASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 AC124016.1-201ENST00000609552 612 ntBASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 AC073912.3-201ENST00000624414 853 ntBASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAI1Q7Z5J4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 AL024507.2-201ENST00000606070 2574 ntBASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAI1Q7Z5J4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAI1Q7Z5J4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms