Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 KRT87P-202ENST00000534226 1464 ntBASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 AC003102.1-202ENST00000563394 1796 ntBASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF111Q6ZNA4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF111Q6ZNA4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF111Q6ZNA4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF111Q6ZNA4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 AC007225.1-201ENST00000566331 1836 ntBASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms