Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 AC087623.3-201ENST00000607047 1098 ntBASIC23.07■■□□□ 1.28
SHC4Q6S5L8 KRT8P36-201ENST00000489121 1440 ntBASIC23.07■■□□□ 1.28
SHC4Q6S5L8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHC4Q6S5L8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.06■■□□□ 1.28
SHC4Q6S5L8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 MIR6821-201ENST00000617625 74 ntBASIC23.06■■□□□ 1.28
SHC4Q6S5L8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHC4Q6S5L8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 AC034268.1-201ENST00000441047 882 ntBASIC23.05■■□□□ 1.28
SHC4Q6S5L8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC4Q6S5L8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC4Q6S5L8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 TCF3P1-201ENST00000423021 1937 ntBASIC23.03■■□□□ 1.28
SHC4Q6S5L8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHC4Q6S5L8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC4Q6S5L8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.01■■□□□ 1.27
SHC4Q6S5L8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms