Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 AL049796.1-201ENST00000565336 1766 ntBASIC21.67■■□□□ 1.06
VARS2Q5ST30 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 AL359736.2-201ENST00000621992 437 ntBASIC21.67■■□□□ 1.06
VARS2Q5ST30 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.67■■□□□ 1.06
VARS2Q5ST30 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VARS2Q5ST30 AC027702.1-201ENST00000563810 1770 ntBASIC21.66■■□□□ 1.06
VARS2Q5ST30 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 POM121L13P-201ENST00000422362 380 ntBASIC21.66■■□□□ 1.06
VARS2Q5ST30 RPS2P4-201ENST00000476944 856 ntBASIC21.66■■□□□ 1.06
VARS2Q5ST30 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 AC069544.1-201ENST00000609399 999 ntBASIC21.66■■□□□ 1.06
VARS2Q5ST30 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VARS2Q5ST30 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
VARS2Q5ST30 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VARS2Q5ST30 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.65■■□□□ 1.06
VARS2Q5ST30 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VARS2Q5ST30 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VARS2Q5ST30 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VARS2Q5ST30 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VARS2Q5ST30 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.65■■□□□ 1.06
VARS2Q5ST30 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
VARS2Q5ST30 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VARS2Q5ST30 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VARS2Q5ST30 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.65■■□□□ 1.06
VARS2Q5ST30 CLDN5-201ENST00000403084 2357 ntBASIC21.65■■□□□ 1.06
VARS2Q5ST30 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.64■■□□□ 1.06
VARS2Q5ST30 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.64■■□□□ 1.06
VARS2Q5ST30 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VARS2Q5ST30 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
VARS2Q5ST30 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 C1QBPP2-201ENST00000528754 825 ntBASIC21.64■■□□□ 1.05
VARS2Q5ST30 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.64■■□□□ 1.05
VARS2Q5ST30 AC005829.2-201ENST00000571422 1056 ntBASIC21.64■■□□□ 1.05
VARS2Q5ST30 RN7SL471P-201ENST00000580476 299 ntBASIC21.64■■□□□ 1.05
VARS2Q5ST30 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
VARS2Q5ST30 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.64■■□□□ 1.05
VARS2Q5ST30 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.64■■□□□ 1.05
VARS2Q5ST30 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VARS2Q5ST30 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VARS2Q5ST30 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VARS2Q5ST30 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.63■■□□□ 1.05
VARS2Q5ST30 RPPH1-201ENST00000516869 333 ntBASIC21.63■■□□□ 1.05
VARS2Q5ST30 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms