Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 AL139246.5-201ENST00000606645 996 ntBASIC19.84■□□□□ 0.77
LSM12Q3MHD2 AL031432.3-201ENST00000607698 485 ntBASIC19.84■□□□□ 0.77
LSM12Q3MHD2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LSM12Q3MHD2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LSM12Q3MHD2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 AC125437.2-201ENST00000625180 2167 ntBASIC19.83■□□□□ 0.76
LSM12Q3MHD2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LSM12Q3MHD2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 AC116562.4-201ENST00000641316 2276 ntBASIC19.82■□□□□ 0.76
LSM12Q3MHD2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.82■□□□□ 0.76
LSM12Q3MHD2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 SUDS3P1-201ENST00000505831 966 ntBASIC19.82■□□□□ 0.76
LSM12Q3MHD2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LSM12Q3MHD2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 AC012414.1-201ENST00000556676 535 ntBASIC19.81■□□□□ 0.76
LSM12Q3MHD2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM12Q3MHD2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 AL354811.1-201ENST00000610286 706 ntBASIC19.8■□□□□ 0.76
LSM12Q3MHD2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LSM12Q3MHD2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms