Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM3P62310 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
LSM3P62310 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
LSM3P62310 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.39■□□□□ 0.54
LSM3P62310 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LSM3P62310 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.39■□□□□ 0.53
LSM3P62310 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.39■□□□□ 0.53
LSM3P62310 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.39■□□□□ 0.53
LSM3P62310 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM3P62310 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.39■□□□□ 0.53
LSM3P62310 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LSM3P62310 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM3P62310 AC133637.1-201ENST00000624115 1537 ntBASIC18.39■□□□□ 0.53
LSM3P62310 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.38■□□□□ 0.53
LSM3P62310 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
LSM3P62310 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM3P62310 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LSM3P62310 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM3P62310 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.38■□□□□ 0.53
LSM3P62310 AC005332.7-201ENST00000614046 2005 ntBASIC18.38■□□□□ 0.53
LSM3P62310 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.38■□□□□ 0.53
LSM3P62310 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LSM3P62310 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM3P62310 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.38■□□□□ 0.53
LSM3P62310 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM3P62310 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LSM3P62310 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LSM3P62310 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 Z92544.1-202ENST00000571933 1220 ntBASIC18.37■□□□□ 0.53
LSM3P62310 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LSM3P62310 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM3P62310 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM3P62310 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
LSM3P62310 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM3P62310 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LSM3P62310 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LSM3P62310 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM3P62310 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LSM3P62310 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.36■□□□□ 0.53
LSM3P62310 AC005082.1-201ENST00000413042 2259 ntBASIC18.36■□□□□ 0.53
LSM3P62310 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.36■□□□□ 0.53
LSM3P62310 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LSM3P62310 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM3P62310 AC137630.3-201ENST00000607245 391 ntBASIC18.36■□□□□ 0.53
LSM3P62310 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM3P62310 AC074183.2-201ENST00000623112 922 ntBASIC18.36■□□□□ 0.53
LSM3P62310 AC093503.3-201ENST00000624917 2352 ntBASIC18.36■□□□□ 0.53
LSM3P62310 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM3P62310 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LSM3P62310 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM3P62310 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms