Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CLTCL1P53675 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC29.48■■■□□ 2.31
CLTCL1P53675 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC29.48■■■□□ 2.31
CLTCL1P53675 AC120498.8-201ENST00000614275 531 ntBASIC29.48■■■□□ 2.31
CLTCL1P53675 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CLTCL1P53675 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC29.48■■■□□ 2.31
CLTCL1P53675 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLTCL1P53675 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLTCL1P53675 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC29.47■■■□□ 2.31
CLTCL1P53675 RPS2P55-201ENST00000397318 883 ntBASIC29.47■■■□□ 2.31
CLTCL1P53675 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC29.47■■■□□ 2.31
CLTCL1P53675 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLTCL1P53675 AC107956.1-201ENST00000494359 873 ntBASIC29.47■■■□□ 2.31
CLTCL1P53675 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLTCL1P53675 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC29.47■■■□□ 2.31
CLTCL1P53675 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC29.47■■■□□ 2.31
CLTCL1P53675 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC29.47■■■□□ 2.31
CLTCL1P53675 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLTCL1P53675 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
CLTCL1P53675 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC29.46■■■□□ 2.31
CLTCL1P53675 TSPY7P-201ENST00000431358 1114 ntBASIC29.46■■■□□ 2.31
CLTCL1P53675 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
CLTCL1P53675 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC29.46■■■□□ 2.31
CLTCL1P53675 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CLTCL1P53675 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC29.46■■■□□ 2.31
CLTCL1P53675 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC29.46■■■□□ 2.31
CLTCL1P53675 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CLTCL1P53675 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC29.45■■■□□ 2.31
CLTCL1P53675 AC073912.3-201ENST00000624414 853 ntBASIC29.45■■■□□ 2.31
CLTCL1P53675 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CLTCL1P53675 Z98882.1-201ENST00000622160 2253 ntBASIC29.45■■■□□ 2.31
CLTCL1P53675 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CLTCL1P53675 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CLTCL1P53675 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CLTCL1P53675 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
CLTCL1P53675 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC29.45■■■□□ 2.3
CLTCL1P53675 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC29.45■■■□□ 2.3
CLTCL1P53675 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC29.45■■■□□ 2.3
CLTCL1P53675 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC29.45■■■□□ 2.3
CLTCL1P53675 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC29.45■■■□□ 2.3
CLTCL1P53675 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CLTCL1P53675 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CLTCL1P53675 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
CLTCL1P53675 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
CLTCL1P53675 THEM4-205ENST00000489410 643 ntTSL 2 BASIC29.44■■■□□ 2.3
CLTCL1P53675 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
CLTCL1P53675 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC29.44■■■□□ 2.3
CLTCL1P53675 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CLTCL1P53675 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC29.44■■■□□ 2.3
CLTCL1P53675 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
CLTCL1P53675 Six3os1_6.1-201ENST00000620790 196 ntBASIC29.44■■■□□ 2.3
CLTCL1P53675 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC29.44■■■□□ 2.3
CLTCL1P53675 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CLTCL1P53675 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 AC011484.1-201ENST00000377652 1995 ntBASIC29.43■■■□□ 2.3
CLTCL1P53675 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
CLTCL1P53675 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC29.43■■■□□ 2.3
CLTCL1P53675 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
CLTCL1P53675 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC29.43■■■□□ 2.3
CLTCL1P53675 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 MYB-221ENST00000527615 2381 ntTSL 5 BASIC29.43■■■□□ 2.3
CLTCL1P53675 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLTCL1P53675 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 GXYLT1P3-201ENST00000453058 1193 ntBASIC29.42■■■□□ 2.3
CLTCL1P53675 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 DHDH-203ENST00000522614 776 ntTSL 5 BASIC29.42■■■□□ 2.3
CLTCL1P53675 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 AC113410.3-201ENST00000623366 203 ntBASIC29.42■■■□□ 2.3
CLTCL1P53675 AL049637.2-201ENST00000641778 930 ntBASIC29.42■■■□□ 2.3
CLTCL1P53675 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC29.42■■■□□ 2.3
CLTCL1P53675 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLTCL1P53675 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
CLTCL1P53675 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC29.41■■■□□ 2.3
CLTCL1P53675 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CLTCL1P53675 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CLTCL1P53675 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CLTCL1P53675 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC29.41■■■□□ 2.3
CLTCL1P53675 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms