Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
ZNF140P52738 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 MIR663A-201ENST00000385250 93 ntBASIC20.37■□□□□ 0.85
ZNF140P52738 MCRIP2P1-201ENST00000394346 511 ntBASIC20.37■□□□□ 0.85
ZNF140P52738 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 AC092666.2-201ENST00000613287 246 ntBASIC20.37■□□□□ 0.85
ZNF140P52738 AL356652.1-201ENST00000615962 565 ntBASIC20.37■□□□□ 0.85
ZNF140P52738 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.37■□□□□ 0.85
ZNF140P52738 AC008694.1-202ENST00000636953 945 ntBASIC20.37■□□□□ 0.85
ZNF140P52738 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF140P52738 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ZNF140P52738 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF140P52738 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZNF140P52738 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZNF140P52738 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF140P52738 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF140P52738 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZNF140P52738 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF140P52738 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF140P52738 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF140P52738 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF140P52738 AC092720.2-201ENST00000602388 1665 ntBASIC20.36■□□□□ 0.85
ZNF140P52738 PGM5P4-201ENST00000421970 445 ntBASIC20.36■□□□□ 0.85
ZNF140P52738 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.36■□□□□ 0.85
ZNF140P52738 CROCCP5-201ENST00000436658 830 ntBASIC20.36■□□□□ 0.85
ZNF140P52738 AC093787.1-201ENST00000450396 207 ntBASIC20.36■□□□□ 0.85
ZNF140P52738 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF140P52738 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
ZNF140P52738 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF140P52738 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF140P52738 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF140P52738 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZNF140P52738 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF140P52738 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF140P52738 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF140P52738 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF140P52738 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF140P52738 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF140P52738 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF140P52738 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF140P52738 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZNF140P52738 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ZNF140P52738 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF140P52738 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF140P52738 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF140P52738 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF140P52738 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF140P52738 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.35■□□□□ 0.85
ZNF140P52738 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF140P52738 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF140P52738 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF140P52738 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF140P52738 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF140P52738 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF140P52738 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.34■□□□□ 0.85
ZNF140P52738 AC133552.2-202ENST00000575694 574 ntBASIC20.34■□□□□ 0.85
ZNF140P52738 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF140P52738 AC010980.2-201ENST00000587099 1412 ntBASIC20.34■□□□□ 0.85
ZNF140P52738 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ZNF140P52738 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF140P52738 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF140P52738 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF140P52738 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF140P52738 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF140P52738 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF140P52738 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF140P52738 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF140P52738 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
ZNF140P52738 AL512625.2-201ENST00000417533 625 ntBASIC20.33■□□□□ 0.85
ZNF140P52738 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF140P52738 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ZNF140P52738 CYP2T3P-201ENST00000601990 817 ntBASIC20.33■□□□□ 0.85
ZNF140P52738 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ZNF140P52738 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF140P52738 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF140P52738 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF140P52738 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF140P52738 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF140P52738 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF140P52738 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF140P52738 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
ZNF140P52738 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms