Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 URB2YJR041C 3525 nt3.22□□□□□ -1.89
SPT20P50875 ETP1YHL010C 1758 nt3.22□□□□□ -1.89
SPT20P50875 SOK2YMR016C 2358 nt3.22□□□□□ -1.89
SPT20P50875 BFA1YJR053W 1725 nt3.22□□□□□ -1.89
SPT20P50875 ECM25YJL201W 1800 nt3.21□□□□□ -1.89
SPT20P50875 SSY1YDR160W 2559 nt3.21□□□□□ -1.9
SPT20P50875 PDC2YDR081C 2778 nt3.21□□□□□ -1.9
SPT20P50875 YDL041WYDL041W 354 nt3.21□□□□□ -1.9
SPT20P50875 FAP7YDL166C 594 nt3.21□□□□□ -1.9
SPT20P50875 PAU2YEL049W 363 nt3.21□□□□□ -1.9
SPT20P50875 LCL2YLR104W 396 nt3.21□□□□□ -1.9
SPT20P50875 YLR140WYLR140W 327 nt3.21□□□□□ -1.9
SPT20P50875 HHF1YBR009C 312 nt3.21□□□□□ -1.9
SPT20P50875 CDC24YAL041W 2565 nt3.21□□□□□ -1.9
SPT20P50875 RAD2YGR258C 3096 nt3.2□□□□□ -1.9
SPT20P50875 YNL010WYNL010W 726 nt3.2□□□□□ -1.9
SPT20P50875 AUS1YOR011W 4185 nt3.2□□□□□ -1.9
SPT20P50875 KAP95YLR347C 2586 nt3.19□□□□□ -1.9
SPT20P50875 NUP82YJL061W 2142 nt3.19□□□□□ -1.9
SPT20P50875 KHA1YJL094C 2622 nt3.19□□□□□ -1.9
SPT20P50875 USE1YGL098W 738 nt3.19□□□□□ -1.9
SPT20P50875 LSM1YJL124C 519 nt3.19□□□□□ -1.9
SPT20P50875 CCW14YLR390W-A 717 nt3.19□□□□□ -1.9
SPT20P50875 RPS18BYML026C 441 nt3.19□□□□□ -1.9
SPT20P50875 RIM20YOR275C 1986 nt3.19□□□□□ -1.9
SPT20P50875 FAS1YKL182W 6156 nt3.18□□□□□ -1.9
SPT20P50875 PEX1YKL197C 3132 nt3.18□□□□□ -1.9
SPT20P50875 tF(GAA)QtF(GAA)Q 75 nt3.18□□□□□ -1.9
SPT20P50875 VPS55YJR044C 423 nt3.18□□□□□ -1.9
SPT20P50875 YAL064W-BYAL064W-B 381 nt3.18□□□□□ -1.9
SPT20P50875 RSC1YGR056W 2787 nt3.18□□□□□ -1.9
SPT20P50875 ARK1YNL020C 1917 nt3.18□□□□□ -1.9
SPT20P50875 CDH1YGL003C 1701 nt3.18□□□□□ -1.9
SPT20P50875 RPN2YIL075C 2838 nt3.18□□□□□ -1.9
SPT20P50875 YEL025CYEL025C 3567 nt3.17□□□□□ -1.9
SPT20P50875 ARG2YJL071W 1725 nt3.17□□□□□ -1.9
SPT20P50875 YEL014CYEL014C 306 nt3.17□□□□□ -1.9
SPT20P50875 YLR053CYLR053C 327 nt3.17□□□□□ -1.9
SPT20P50875 CYB5YNL111C 363 nt3.17□□□□□ -1.9
SPT20P50875 YBL083CYBL083C 426 nt3.17□□□□□ -1.9
SPT20P50875 TOP1YOL006C 2310 nt3.17□□□□□ -1.9
SPT20P50875 MNT3YIL014W 1893 nt3.17□□□□□ -1.9
SPT20P50875 GCN1YGL195W 8019 nt3.17□□□□□ -1.9
SPT20P50875 RSF2YJR127C 4143 nt3.17□□□□□ -1.9
SPT20P50875 IOC3YFR013W 2364 nt3.16□□□□□ -1.9
SPT20P50875 AKR1YDR264C 2295 nt3.16□□□□□ -1.9
SPT20P50875 PSF1YDR013W 627 nt3.16□□□□□ -1.9
SPT20P50875 YER039C-AYER039C-A 219 nt3.16□□□□□ -1.9
SPT20P50875 YIL058WYIL058W 285 nt3.16□□□□□ -1.9
SPT20P50875 AYR1YIL124W 894 nt3.16□□□□□ -1.9
SPT20P50875 COF1YLL050C 432 nt3.16□□□□□ -1.9
SPT20P50875 RPL22AYLR061W 366 nt3.16□□□□□ -1.9
SPT20P50875 RPA135YPR010C 3612 nt3.16□□□□□ -1.9
SPT20P50875 MSS11YMR164C 2277 nt3.16□□□□□ -1.9
SPT20P50875 YPK1YKL126W 2043 nt3.15□□□□□ -1.9
SPT20P50875 PKH1YDR490C 2301 nt3.15□□□□□ -1.9
SPT20P50875 TIM13YGR181W 318 nt3.15□□□□□ -1.91
SPT20P50875 YHL006W-AYHL006W-A 354 nt3.15□□□□□ -1.91
SPT20P50875 MIT1YEL007W 2001 nt3.15□□□□□ -1.91
SPT20P50875 RAD5YLR032W 3510 nt3.14□□□□□ -1.91
SPT20P50875 KEL2YGR238C 2649 nt3.14□□□□□ -1.91
SPT20P50875 YDR193WYDR193W 399 nt3.14□□□□□ -1.91
SPT20P50875 YDR524C-AYDR524C-A 120 nt3.14□□□□□ -1.91
SPT20P50875 YLR416CYLR416C 399 nt3.14□□□□□ -1.91
SPT20P50875 RPL36AYMR194W 303 nt3.14□□□□□ -1.91
SPT20P50875 GIS2YNL255C 462 nt3.14□□□□□ -1.91
SPT20P50875 RPS7AYOR096W 573 nt3.14□□□□□ -1.91
SPT20P50875 YDL176WYDL176W 2127 nt3.14□□□□□ -1.91
SPT20P50875 VPS64YDR200C 1815 nt3.14□□□□□ -1.91
SPT20P50875 YJL181WYJL181W 1836 nt3.14□□□□□ -1.91
SPT20P50875 CCM1YGR150C 2595 nt3.13□□□□□ -1.91
SPT20P50875 21S_rRNA21S_rRNA 3296 nt3.13□□□□□ -1.91
SPT20P50875 YGL239CYGL239C 315 nt3.13□□□□□ -1.91
SPT20P50875 RPS23AYGR118W 438 nt3.13□□□□□ -1.91
SPT20P50875 YHL041WYHL041W 450 nt3.13□□□□□ -1.91
SPT20P50875 YPR014CYPR014C 330 nt3.13□□□□□ -1.91
SPT20P50875 YPR053CYPR053C 456 nt3.13□□□□□ -1.91
SPT20P50875 YPR063CYPR063C 423 nt3.13□□□□□ -1.91
SPT20P50875 YNL034WYNL034W 1839 nt3.13□□□□□ -1.91
SPT20P50875 YAK1YJL141C 2424 nt3.13□□□□□ -1.91
SPT20P50875 CIN1YOR349W 3045 nt3.13□□□□□ -1.91
SPT20P50875 STT4YLR305C 5703 nt3.13□□□□□ -1.91
SPT20P50875 SEC15YGL233W 2733 nt3.12□□□□□ -1.91
SPT20P50875 snR79snR79 84 nt3.12□□□□□ -1.91
SPT20P50875 DLS1YJL065C 504 nt3.12□□□□□ -1.91
SPT20P50875 RPS21AYKR057W 264 nt3.12□□□□□ -1.91
SPT20P50875 RSM19YNR037C 276 nt3.12□□□□□ -1.91
SPT20P50875 HHT1YBR010W 411 nt3.12□□□□□ -1.91
SPT20P50875 SET1YHR119W 3243 nt3.11□□□□□ -1.91
SPT20P50875 YER121WYER121W 345 nt3.11□□□□□ -1.91
SPT20P50875 OLI1Q0130 231 nt3.11□□□□□ -1.91
SPT20P50875 YMR122W-AYMR122W-A 255 nt3.11□□□□□ -1.91
SPT20P50875 STU2YLR045C 2667 nt3.11□□□□□ -1.91
SPT20P50875 GYP7YDL234C 2241 nt3.11□□□□□ -1.91
SPT20P50875 snR60snR60 104 nt3.1□□□□□ -1.91
SPT20P50875 MRP10YDL045W-A 288 nt3.1□□□□□ -1.91
SPT20P50875 PAU10YDR542W 363 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)DtK(UUU)D 73 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)G1tK(UUU)G1 73 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)G2tK(UUU)G2 73 nt3.1□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms