Protein–RNA interactions for Protein: P49279

SLC11A1, Natural resistance-associated macrophage protein 1, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1P49279 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC11A1P49279 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC11A1P49279 SNORA78-201ENST00000459373 127 ntBASIC21.82■■□□□ 1.08
SLC11A1P49279 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.82■■□□□ 1.08
SLC11A1P49279 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
SLC11A1P49279 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
SLC11A1P49279 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.82■■□□□ 1.08
SLC11A1P49279 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC11A1P49279 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC11A1P49279 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC11A1P49279 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC11A1P49279 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SLC11A1P49279 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC11A1P49279 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC11A1P49279 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC11A1P49279 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SLC11A1P49279 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC11A1P49279 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC11A1P49279 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC11A1P49279 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC11A1P49279 AC124016.1-201ENST00000609552 612 ntBASIC21.81■■□□□ 1.08
SLC11A1P49279 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC11A1P49279 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC11A1P49279 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SLC11A1P49279 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SLC11A1P49279 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC11A1P49279 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SLC11A1P49279 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC11A1P49279 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC11A1P49279 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC11A1P49279 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC11A1P49279 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC11A1P49279 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC11A1P49279 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC11A1P49279 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SLC11A1P49279 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC11A1P49279 AL390719.1-204ENST00000412397 1219 ntBASIC21.79■■□□□ 1.08
SLC11A1P49279 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC11A1P49279 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC11A1P49279 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC11A1P49279 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC11A1P49279 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC11A1P49279 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC11A1P49279 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC11A1P49279 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC11A1P49279 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC11A1P49279 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC11A1P49279 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC11A1P49279 AC239809.2-201ENST00000415381 517 ntBASIC21.78■■□□□ 1.08
SLC11A1P49279 AC133681.1-201ENST00000465482 601 ntBASIC21.78■■□□□ 1.08
SLC11A1P49279 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SLC11A1P49279 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC11A1P49279 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC11A1P49279 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC11A1P49279 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC11A1P49279 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC11A1P49279 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC11A1P49279 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC11A1P49279 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC11A1P49279 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC11A1P49279 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC11A1P49279 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC11A1P49279 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SLC11A1P49279 Z98882.1-201ENST00000622160 2253 ntBASIC21.77■■□□□ 1.08
SLC11A1P49279 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.77■■□□□ 1.07
SLC11A1P49279 AL117328.2-201ENST00000624617 1940 ntBASIC21.76■■□□□ 1.07
SLC11A1P49279 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SLC11A1P49279 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC11A1P49279 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC11A1P49279 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC11A1P49279 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SLC11A1P49279 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC11A1P49279 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC11A1P49279 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SLC11A1P49279 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SLC11A1P49279 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms