Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 ALK1YGL021W 2283 nt0.74□□□□□ -2.29
VPS55P47111 EAF1YDR359C 2949 nt0.74□□□□□ -2.29
VPS55P47111 SMC1YFL008W 3678 nt0.74□□□□□ -2.29
VPS55P47111 SHE4YOR035C 2370 nt0.74□□□□□ -2.29
VPS55P47111 MDM32YOR147W 1869 nt0.73□□□□□ -2.29
VPS55P47111 VOA1YGR106C 798 nt0.73□□□□□ -2.29
VPS55P47111 PAM16YJL104W 450 nt0.73□□□□□ -2.29
VPS55P47111 DLT1YMR126C 1029 nt0.73□□□□□ -2.29
VPS55P47111 YNL162W-AYNL162W-A 219 nt0.73□□□□□ -2.29
VPS55P47111 YOR029WYOR029W 336 nt0.73□□□□□ -2.29
VPS55P47111 BFA1YJR053W 1725 nt0.72□□□□□ -2.29
VPS55P47111 RPN9YDR427W 1182 nt0.72□□□□□ -2.29
VPS55P47111 RGI1YER067W 486 nt0.72□□□□□ -2.29
VPS55P47111 EMT1tM(CAU)D 73 nt0.72□□□□□ -2.29
VPS55P47111 EMT5tM(CAU)J1 73 nt0.72□□□□□ -2.29
VPS55P47111 EMT3tM(CAU)J2 73 nt0.72□□□□□ -2.29
VPS55P47111 EMT4tM(CAU)M 73 nt0.72□□□□□ -2.29
VPS55P47111 EMT2tM(CAU)O2 73 nt0.72□□□□□ -2.29
VPS55P47111 NOP10YHR072W-A 177 nt0.72□□□□□ -2.29
VPS55P47111 YJL022WYJL022W 309 nt0.72□□□□□ -2.29
VPS55P47111 RPS18BYML026C 441 nt0.72□□□□□ -2.29
VPS55P47111 POP8YBL018C 402 nt0.72□□□□□ -2.29
VPS55P47111 YNL235CYNL235C 432 nt0.72□□□□□ -2.29
VPS55P47111 MGE1YOR232W 687 nt0.72□□□□□ -2.29
VPS55P47111 YPR146CYPR146C 330 nt0.72□□□□□ -2.29
VPS55P47111 ARP9YMR033W 1404 nt0.72□□□□□ -2.29
VPS55P47111 AEP1YMR064W 1557 nt0.71□□□□□ -2.3
VPS55P47111 RRI1YDL216C 1323 nt0.71□□□□□ -2.3
VPS55P47111 YDR210W-AYDR210W-A 1317 nt0.71□□□□□ -2.3
VPS55P47111 YOR343W-AYOR343W-A 1317 nt0.71□□□□□ -2.3
VPS55P47111 YCR090CYCR090C 549 nt0.71□□□□□ -2.3
VPS55P47111 TMA22YJR014W 597 nt0.71□□□□□ -2.3
VPS55P47111 CTK3YML112W 891 nt0.71□□□□□ -2.3
VPS55P47111 SWM2YNR004W 441 nt0.71□□□□□ -2.3
VPS55P47111 CSI2YOL007C 1026 nt0.71□□□□□ -2.3
VPS55P47111 RRP7YCL031C 894 nt0.71□□□□□ -2.3
VPS55P47111 YLR149CYLR149C 2193 nt0.71□□□□□ -2.3
VPS55P47111 COG4YPR105C 2586 nt0.71□□□□□ -2.3
VPS55P47111 UBP3YER151C 2739 nt0.7□□□□□ -2.3
VPS55P47111 YDL157CYDL157C 357 nt0.7□□□□□ -2.3
VPS55P47111 FAR7YFR008W 666 nt0.7□□□□□ -2.3
VPS55P47111 RPL40AYIL148W 387 nt0.7□□□□□ -2.3
VPS55P47111 YJL114WYJL114W 681 nt0.7□□□□□ -2.3
VPS55P47111 OST2YOR103C 393 nt0.7□□□□□ -2.3
VPS55P47111 CIN2YPL241C 807 nt0.7□□□□□ -2.3
VPS55P47111 VID24YBR105C 1089 nt0.7□□□□□ -2.3
VPS55P47111 SPT14YPL175W 1359 nt0.7□□□□□ -2.3
VPS55P47111 DOP1YDR141C 5097 nt0.69□□□□□ -2.3
VPS55P47111 VPS55YJR044C 423 nt0.69□□□□□ -2.3
VPS55P47111 CLU1YMR012W 3834 nt0.69□□□□□ -2.3
VPS55P47111 ERP4YOR016C 624 nt0.69□□□□□ -2.3
VPS55P47111 YPR063CYPR063C 423 nt0.69□□□□□ -2.3
VPS55P47111 PAU24YBR301W 363 nt0.69□□□□□ -2.3
VPS55P47111 AZF1YOR113W 2745 nt0.69□□□□□ -2.3
VPS55P47111 PAC1YOR269W 1485 nt0.68□□□□□ -2.3
VPS55P47111 SNA4YDL123W 423 nt0.68□□□□□ -2.3
VPS55P47111 HSK3YKL138C-A 210 nt0.68□□□□□ -2.3
VPS55P47111 COF1YLL050C 432 nt0.68□□□□□ -2.3
VPS55P47111 YKE2YLR200W 345 nt0.68□□□□□ -2.3
VPS55P47111 snR14snR14 160 nt0.68□□□□□ -2.3
VPS55P47111 SUT2YPR009W 807 nt0.68□□□□□ -2.3
VPS55P47111 SPP381YBR152W 876 nt0.68□□□□□ -2.3
VPS55P47111 NCL1YBL024W 2055 nt0.68□□□□□ -2.3
VPS55P47111 UFD2YDL190C 2886 nt0.67□□□□□ -2.3
VPS55P47111 YDR290WYDR290W 330 nt0.67□□□□□ -2.3
VPS55P47111 VAB2YEL005C 849 nt0.67□□□□□ -2.3
VPS55P47111 YET1YKL065C 621 nt0.67□□□□□ -2.3
VPS55P47111 YKL065W-AYKL065W-A 222 nt0.67□□□□□ -2.3
VPS55P47111 MVP1YMR004W 1536 nt0.67□□□□□ -2.3
VPS55P47111 ECM25YJL201W 1800 nt0.66□□□□□ -2.3
VPS55P47111 YDL025W-AYDL025W-A 105 nt0.66□□□□□ -2.3
VPS55P47111 NSE4YDL105W 1209 nt0.66□□□□□ -2.3
VPS55P47111 YDR115WYDR115W 318 nt0.66□□□□□ -2.3
VPS55P47111 RPI1YIL119C 1224 nt0.66□□□□□ -2.3
VPS55P47111 SDL1YIL167W 633 nt0.66□□□□□ -2.3
VPS55P47111 YJL119CYJL119C 324 nt0.66□□□□□ -2.3
VPS55P47111 GPI2YPL076W 843 nt0.66□□□□□ -2.3
VPS55P47111 AME1YBR211C 975 nt0.66□□□□□ -2.3
VPS55P47111 PIG2YIL045W 1617 nt0.66□□□□□ -2.3
VPS55P47111 ZRG8YER033C 3231 nt0.66□□□□□ -2.3
VPS55P47111 NUP188YML103C 4968 nt0.66□□□□□ -2.3
VPS55P47111 IFH1YLR223C 3258 nt0.65□□□□□ -2.3
VPS55P47111 DGR2YKL121W 2559 nt0.65□□□□□ -2.3
VPS55P47111 SMD1YGR074W 441 nt0.65□□□□□ -2.31
VPS55P47111 YIP1YGR172C 747 nt0.65□□□□□ -2.31
VPS55P47111 PEP8YJL053W 1140 nt0.65□□□□□ -2.31
VPS55P47111 PAI3YMR174C 207 nt0.65□□□□□ -2.31
VPS55P47111 LSM7YNL147W 348 nt0.65□□□□□ -2.31
VPS55P47111 YNR021WYNR021W 1215 nt0.65□□□□□ -2.31
VPS55P47111 SNC2YOR327C 348 nt0.65□□□□□ -2.31
VPS55P47111 YPR142CYPR142C 564 nt0.65□□□□□ -2.31
VPS55P47111 LDH1YBR204C 1128 nt0.65□□□□□ -2.31
VPS55P47111 ZRG17YNR039C 1818 nt0.64□□□□□ -2.31
VPS55P47111 NSE3YDR288W 912 nt0.64□□□□□ -2.31
VPS55P47111 YER046W-AYER046W-A 330 nt0.64□□□□□ -2.31
VPS55P47111 PRP38YGR075C 729 nt0.64□□□□□ -2.31
VPS55P47111 GIC1YHR061C 945 nt0.64□□□□□ -2.31
VPS55P47111 RPS30BYOR182C 192 nt0.64□□□□□ -2.31
VPS55P47111 YPL135C-AYPL135C-A 174 nt0.64□□□□□ -2.31
VPS55P47111 YGR250CYGR250C 2346 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms