Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 FAM8A6P-201ENST00000407496 1135 ntBASIC18.82■□□□□ 0.6
ATRXP46100 AC092183.1-201ENST00000469884 875 ntBASIC18.82■□□□□ 0.6
ATRXP46100 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.82■□□□□ 0.6
ATRXP46100 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.82■□□□□ 0.6
ATRXP46100 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.82■□□□□ 0.6
ATRXP46100 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.82■□□□□ 0.6
ATRXP46100 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATRXP46100 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATRXP46100 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATRXP46100 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.81■□□□□ 0.6
ATRXP46100 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.81■□□□□ 0.6
ATRXP46100 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATRXP46100 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATRXP46100 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATRXP46100 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATRXP46100 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.8■□□□□ 0.6
ATRXP46100 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.8■□□□□ 0.6
ATRXP46100 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.8■□□□□ 0.6
ATRXP46100 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 AL022342.1-201ENST00000400363 863 ntBASIC18.8■□□□□ 0.6
ATRXP46100 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.8■□□□□ 0.6
ATRXP46100 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
ATRXP46100 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATRXP46100 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATRXP46100 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATRXP46100 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATRXP46100 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.79■□□□□ 0.6
ATRXP46100 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATRXP46100 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATRXP46100 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATRXP46100 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATRXP46100 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
ATRXP46100 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATRXP46100 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATRXP46100 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.79■□□□□ 0.6
ATRXP46100 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.79■□□□□ 0.6
ATRXP46100 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.79■□□□□ 0.6
ATRXP46100 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.79■□□□□ 0.6
ATRXP46100 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
ATRXP46100 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATRXP46100 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 ATP5G1P1-201ENST00000448724 379 ntBASIC18.78■□□□□ 0.6
ATRXP46100 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.78■□□□□ 0.6
ATRXP46100 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 FAM197Y1-201ENST00000421178 764 ntBASIC18.78■□□□□ 0.6
ATRXP46100 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.78■□□□□ 0.6
ATRXP46100 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.78■□□□□ 0.6
ATRXP46100 AC005829.2-201ENST00000571422 1056 ntBASIC18.78■□□□□ 0.6
ATRXP46100 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
ATRXP46100 AL355385.1-201ENST00000606123 409 ntBASIC18.78■□□□□ 0.6
ATRXP46100 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATRXP46100 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.78■□□□□ 0.6
ATRXP46100 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATRXP46100 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATRXP46100 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.77■□□□□ 0.6
ATRXP46100 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.77■□□□□ 0.6
ATRXP46100 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATRXP46100 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATRXP46100 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.77■□□□□ 0.6
ATRXP46100 KRT17P6-201ENST00000453795 1220 ntBASIC18.77■□□□□ 0.6
ATRXP46100 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.77■□□□□ 0.6
ATRXP46100 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATRXP46100 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATRXP46100 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATRXP46100 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ATRXP46100 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATRXP46100 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ATRXP46100 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ATRXP46100 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.77■□□□□ 0.59
ATRXP46100 REXO1L10P-201ENST00000615707 1290 ntBASIC18.77■□□□□ 0.59
ATRXP46100 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATRXP46100 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.76■□□□□ 0.59
ATRXP46100 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ATRXP46100 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATRXP46100 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms