Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
GDNFP39905 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
GDNFP39905 AP004607.7-201ENST00000527152 1677 ntBASIC17.74■□□□□ 0.43
GDNFP39905 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.74■□□□□ 0.43
GDNFP39905 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GDNFP39905 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GDNFP39905 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.73■□□□□ 0.43
GDNFP39905 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.73■□□□□ 0.43
GDNFP39905 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.73■□□□□ 0.43
GDNFP39905 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.73■□□□□ 0.43
GDNFP39905 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GDNFP39905 AC005837.3-201ENST00000612163 286 ntBASIC17.73■□□□□ 0.43
GDNFP39905 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.73■□□□□ 0.43
GDNFP39905 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GDNFP39905 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.73■□□□□ 0.43
GDNFP39905 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.73■□□□□ 0.43
GDNFP39905 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.73■□□□□ 0.43
GDNFP39905 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDNFP39905 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
GDNFP39905 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
GDNFP39905 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.72■□□□□ 0.43
GDNFP39905 MIR638-201ENST00000385237 100 ntBASIC17.72■□□□□ 0.43
GDNFP39905 AC091305.1-201ENST00000479476 895 ntBASIC17.72■□□□□ 0.43
GDNFP39905 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GDNFP39905 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GDNFP39905 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.72■□□□□ 0.43
GDNFP39905 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDNFP39905 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GDNFP39905 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GDNFP39905 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.71■□□□□ 0.43
GDNFP39905 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.71■□□□□ 0.43
GDNFP39905 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 AC142381.2-201ENST00000566120 298 ntBASIC17.71■□□□□ 0.43
GDNFP39905 SMUG1P1-201ENST00000590640 811 ntBASIC17.71■□□□□ 0.43
GDNFP39905 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDNFP39905 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
GDNFP39905 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.71■□□□□ 0.43
GDNFP39905 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDNFP39905 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDNFP39905 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GDNFP39905 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.7■□□□□ 0.42
GDNFP39905 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GDNFP39905 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.7■□□□□ 0.42
GDNFP39905 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GDNFP39905 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.7■□□□□ 0.42
GDNFP39905 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.7■□□□□ 0.42
GDNFP39905 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.7■□□□□ 0.42
GDNFP39905 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GDNFP39905 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDNFP39905 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.7■□□□□ 0.42
GDNFP39905 TCF3P1-201ENST00000423021 1937 ntBASIC17.7■□□□□ 0.42
GDNFP39905 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
GDNFP39905 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.7■□□□□ 0.42
GDNFP39905 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
GDNFP39905 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
GDNFP39905 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GDNFP39905 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GDNFP39905 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms