Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.86■■□□□ 1.73
RFC4P35249 AF186192.3-201ENST00000583427 947 ntBASIC25.86■■□□□ 1.73
RFC4P35249 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RFC4P35249 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RFC4P35249 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
RFC4P35249 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RFC4P35249 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RFC4P35249 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.85■■□□□ 1.73
RFC4P35249 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.85■■□□□ 1.73
RFC4P35249 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.85■■□□□ 1.73
RFC4P35249 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFC4P35249 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.85■■□□□ 1.73
RFC4P35249 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RFC4P35249 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
RFC4P35249 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RFC4P35249 ARMC10P1-201ENST00000313754 855 ntBASIC25.84■■□□□ 1.73
RFC4P35249 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.84■■□□□ 1.73
RFC4P35249 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.84■■□□□ 1.73
RFC4P35249 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RFC4P35249 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RFC4P35249 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RFC4P35249 HTR7P1-201ENST00000538670 1336 ntBASIC25.84■■□□□ 1.73
RFC4P35249 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RFC4P35249 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RFC4P35249 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RFC4P35249 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.83■■□□□ 1.73
RFC4P35249 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RFC4P35249 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.83■■□□□ 1.73
RFC4P35249 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.83■■□□□ 1.73
RFC4P35249 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.83■■□□□ 1.73
RFC4P35249 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.83■■□□□ 1.73
RFC4P35249 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
RFC4P35249 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFC4P35249 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFC4P35249 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFC4P35249 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFC4P35249 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.82■■□□□ 1.72
RFC4P35249 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.82■■□□□ 1.72
RFC4P35249 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFC4P35249 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.82■■□□□ 1.72
RFC4P35249 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFC4P35249 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.82■■□□□ 1.72
RFC4P35249 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
RFC4P35249 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 KRT16P5-201ENST00000455284 522 ntBASIC25.81■■□□□ 1.72
RFC4P35249 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.81■■□□□ 1.72
RFC4P35249 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.81■■□□□ 1.72
RFC4P35249 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.81■■□□□ 1.72
RFC4P35249 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFC4P35249 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
RFC4P35249 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
RFC4P35249 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.8■■□□□ 1.72
RFC4P35249 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.8■■□□□ 1.72
RFC4P35249 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.8■■□□□ 1.72
RFC4P35249 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.8■■□□□ 1.72
RFC4P35249 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.8■■□□□ 1.72
RFC4P35249 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
RFC4P35249 AL121829.2-201ENST00000620908 328 ntBASIC25.8■■□□□ 1.72
RFC4P35249 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.8■■□□□ 1.72
RFC4P35249 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFC4P35249 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.8■■□□□ 1.72
RFC4P35249 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.79■■□□□ 1.72
RFC4P35249 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RFC4P35249 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.79■■□□□ 1.72
RFC4P35249 FAM197Y1-201ENST00000421178 764 ntBASIC25.79■■□□□ 1.72
RFC4P35249 AL353807.1-201ENST00000427475 662 ntBASIC25.79■■□□□ 1.72
RFC4P35249 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.79■■□□□ 1.72
RFC4P35249 AL049597.2-201ENST00000565575 961 ntBASIC25.79■■□□□ 1.72
RFC4P35249 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.79■■□□□ 1.72
RFC4P35249 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.79■■□□□ 1.72
RFC4P35249 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.79■■□□□ 1.72
RFC4P35249 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFC4P35249 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
RFC4P35249 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.79■■□□□ 1.72
RFC4P35249 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFC4P35249 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFC4P35249 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.79■■□□□ 1.72
RFC4P35249 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms