Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCD3P28288 AL138781.1-201ENST00000566567 1274 ntBASIC18.82■□□□□ 0.6
ABCD3P28288 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.82■□□□□ 0.6
ABCD3P28288 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.82■□□□□ 0.6
ABCD3P28288 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCD3P28288 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCD3P28288 AL356652.1-201ENST00000615962 565 ntBASIC18.82■□□□□ 0.6
ABCD3P28288 AL589743.5-201ENST00000616611 1050 ntBASIC18.82■□□□□ 0.6
ABCD3P28288 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ABCD3P28288 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCD3P28288 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCD3P28288 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCD3P28288 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ABCD3P28288 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCD3P28288 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ABCD3P28288 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ABCD3P28288 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCD3P28288 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.81■□□□□ 0.6
ABCD3P28288 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 LSM12P1-201ENST00000411836 588 ntBASIC18.81■□□□□ 0.6
ABCD3P28288 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCD3P28288 AC142086.2-201ENST00000569753 217 ntBASIC18.81■□□□□ 0.6
ABCD3P28288 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCD3P28288 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 AC105020.6-201ENST00000621523 1217 ntBASIC18.81■□□□□ 0.6
ABCD3P28288 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCD3P28288 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCD3P28288 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCD3P28288 AC007225.1-201ENST00000566331 1836 ntBASIC18.81■□□□□ 0.6
ABCD3P28288 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ABCD3P28288 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ABCD3P28288 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCD3P28288 MIR4758-201ENST00000577688 71 ntBASIC18.8■□□□□ 0.6
ABCD3P28288 AC092118.2-201ENST00000613495 667 ntBASIC18.8■□□□□ 0.6
ABCD3P28288 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 AL121603.2-201ENST00000557373 2117 ntBASIC18.8■□□□□ 0.6
ABCD3P28288 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ABCD3P28288 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ABCD3P28288 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ABCD3P28288 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCD3P28288 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCD3P28288 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCD3P28288 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ABCD3P28288 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.79■□□□□ 0.6
ABCD3P28288 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCD3P28288 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCD3P28288 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCD3P28288 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCD3P28288 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCD3P28288 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ABCD3P28288 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCD3P28288 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ABCD3P28288 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCD3P28288 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCD3P28288 KRT8P36-201ENST00000489121 1440 ntBASIC18.78■□□□□ 0.6
ABCD3P28288 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCD3P28288 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ABCD3P28288 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ABCD3P28288 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.78■□□□□ 0.6
ABCD3P28288 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ABCD3P28288 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.78■□□□□ 0.6
ABCD3P28288 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.78■□□□□ 0.6
ABCD3P28288 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCD3P28288 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCD3P28288 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCD3P28288 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ABCD3P28288 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCD3P28288 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCD3P28288 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCD3P28288 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCD3P28288 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCD3P28288 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms