Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PTPN3P26045 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN3P26045 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN3P26045 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN3P26045 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.83■□□□□ 0.93
PTPN3P26045 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN3P26045 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PTPN3P26045 AC092437.1-201ENST00000624794 1048 ntBASIC20.83■□□□□ 0.93
PTPN3P26045 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PTPN3P26045 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.83■□□□□ 0.92
PTPN3P26045 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN3P26045 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN3P26045 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN3P26045 AC092720.2-201ENST00000602388 1665 ntBASIC20.83■□□□□ 0.92
PTPN3P26045 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN3P26045 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN3P26045 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 AC068338.2-201ENST00000563278 1430 ntBASIC20.82■□□□□ 0.92
PTPN3P26045 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTPN3P26045 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN3P26045 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN3P26045 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.82■□□□□ 0.92
PTPN3P26045 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN3P26045 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN3P26045 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN3P26045 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN3P26045 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.81■□□□□ 0.92
PTPN3P26045 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 KRT8P36-201ENST00000489121 1440 ntBASIC20.81■□□□□ 0.92
PTPN3P26045 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN3P26045 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 IKBKGP1-201ENST00000612193 1073 ntBASIC20.81■□□□□ 0.92
PTPN3P26045 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PTPN3P26045 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN3P26045 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN3P26045 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PTPN3P26045 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN3P26045 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN3P26045 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PTPN3P26045 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 AL512408.1-201ENST00000569378 2000 ntBASIC20.8■□□□□ 0.92
PTPN3P26045 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTPN3P26045 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN3P26045 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN3P26045 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
PTPN3P26045 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN3P26045 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
PTPN3P26045 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN3P26045 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN3P26045 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
PTPN3P26045 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN3P26045 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN3P26045 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms