Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.28■■□□□ 1.64
COL11A2P13942 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.28■■□□□ 1.64
COL11A2P13942 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.28■■□□□ 1.64
COL11A2P13942 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.28■■□□□ 1.64
COL11A2P13942 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.28■■□□□ 1.64
COL11A2P13942 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL11A2P13942 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
COL11A2P13942 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
COL11A2P13942 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL11A2P13942 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL11A2P13942 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
COL11A2P13942 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.27■■□□□ 1.64
COL11A2P13942 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL11A2P13942 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL11A2P13942 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.27■■□□□ 1.64
COL11A2P13942 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL11A2P13942 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.26■■□□□ 1.63
COL11A2P13942 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.26■■□□□ 1.63
COL11A2P13942 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.26■■□□□ 1.63
COL11A2P13942 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.26■■□□□ 1.63
COL11A2P13942 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.26■■□□□ 1.63
COL11A2P13942 AL390719.1-204ENST00000412397 1219 ntBASIC25.26■■□□□ 1.63
COL11A2P13942 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.26■■□□□ 1.63
COL11A2P13942 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 REXO1L10P-201ENST00000615707 1290 ntBASIC25.26■■□□□ 1.63
COL11A2P13942 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL11A2P13942 AC092865.7-201ENST00000641832 219 ntBASIC25.26■■□□□ 1.63
COL11A2P13942 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL11A2P13942 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL11A2P13942 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL11A2P13942 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL11A2P13942 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL11A2P13942 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL11A2P13942 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.24■■□□□ 1.63
COL11A2P13942 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL11A2P13942 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL11A2P13942 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL11A2P13942 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.24■■□□□ 1.63
COL11A2P13942 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
COL11A2P13942 KRT16P5-201ENST00000455284 522 ntBASIC25.24■■□□□ 1.63
COL11A2P13942 AC145285.6-201ENST00000604632 637 ntBASIC25.24■■□□□ 1.63
COL11A2P13942 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL11A2P13942 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL11A2P13942 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.23■■□□□ 1.63
COL11A2P13942 AC113347.1-201ENST00000413321 391 ntBASIC25.23■■□□□ 1.63
COL11A2P13942 AL353807.1-201ENST00000427475 662 ntBASIC25.23■■□□□ 1.63
COL11A2P13942 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.23■■□□□ 1.63
COL11A2P13942 RBM17P1-201ENST00000453646 1190 ntBASIC25.23■■□□□ 1.63
COL11A2P13942 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.23■■□□□ 1.63
COL11A2P13942 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL11A2P13942 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL11A2P13942 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.23■■□□□ 1.63
COL11A2P13942 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL11A2P13942 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL11A2P13942 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL11A2P13942 KRT18P57-201ENST00000443599 1254 ntBASIC25.23■■□□□ 1.63
COL11A2P13942 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL11A2P13942 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
COL11A2P13942 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.23■■□□□ 1.63
COL11A2P13942 AL121829.2-201ENST00000620908 328 ntBASIC25.23■■□□□ 1.63
COL11A2P13942 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.23■■□□□ 1.63
COL11A2P13942 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
COL11A2P13942 AC079598.2-202ENST00000546624 1451 ntBASIC25.22■■□□□ 1.63
COL11A2P13942 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL11A2P13942 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL11A2P13942 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
COL11A2P13942 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.22■■□□□ 1.63
COL11A2P13942 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
COL11A2P13942 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
COL11A2P13942 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL11A2P13942 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.22■■□□□ 1.63
COL11A2P13942 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.22■■□□□ 1.63
COL11A2P13942 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.22■■□□□ 1.63
COL11A2P13942 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL11A2P13942 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL11A2P13942 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL11A2P13942 FAM197Y1-201ENST00000421178 764 ntBASIC25.21■■□□□ 1.63
COL11A2P13942 AL390955.1-201ENST00000428694 934 ntBASIC25.21■■□□□ 1.63
COL11A2P13942 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.21■■□□□ 1.63
COL11A2P13942 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 HTR7P1-201ENST00000538670 1336 ntBASIC25.21■■□□□ 1.63
COL11A2P13942 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL11A2P13942 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
COL11A2P13942 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
COL11A2P13942 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.2■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms