Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeast

Known RBP Predictions only

Length 478 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY1A-H	P0C2I4	tN(GUU)L	tN(GUU)L	74 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	tN(GUU)N1	tN(GUU)N1	74 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	tN(GUU)N2	tN(GUU)N2	74 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	tN(GUU)O1	tN(GUU)O1	74 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	tN(GUU)O2	tN(GUU)O2	74 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	tN(GUU)P	tN(GUU)P	74 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	YLR154W-B	YLR154W-B	165 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	YMR324C	YMR324C	243 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	YOR218C	YOR218C	420 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	HFM1	YGL251C	3564 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	HEH2	YDR458C	1992 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	IPT1	YDR072C	1584 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	YOL075C	YOL075C	3885 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	KEL2	YGR238C	2649 nt		4.05	□□□□□ -1.76
TY1A-H	P0C2I4	HSC82	YMR186W	2118 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	RSC1	YGR056W	2787 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	tR(ACG)J	tR(ACG)J	73 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	HSX1	tR(CCU)J	72 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	YLR154W-A	YLR154W-A	186 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	YLR416C	YLR416C	399 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	ACM1	YPL267W	630 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	snR191	snR191	274 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	KAR3	YPR141C	2190 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	COS111	YBR203W	2775 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	MCM10	YIL150C	1716 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	RIX1	YHR197W	2292 nt		4.04	□□□□□ -1.76
TY1A-H	P0C2I4	VAC7	YNL054W	3498 nt		4.03	□□□□□ -1.76
TY1A-H	P0C2I4	YDL034W	YDL034W	345 nt		4.03	□□□□□ -1.76
TY1A-H	P0C2I4	PRE4	YFR050C	801 nt		4.03	□□□□□ -1.76
TY1A-H	P0C2I4	YBR277C	YBR277C	402 nt		4.03	□□□□□ -1.76
TY1A-H	P0C2I4	OLE1	YGL055W	1533 nt		4.03	□□□□□ -1.76
TY1A-H	P0C2I4	PLC1	YPL268W	2610 nt		4.03	□□□□□ -1.76
TY1A-H	P0C2I4	TFC8	YPL007C	1767 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	KIC1	YHR102W	3243 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	TEL1	YBL088C	8364 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	YER053C-A	YER053C-A	114 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	RPB10	YOR210W	213 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	YBR221W-A	YBR221W-A	105 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	DUF1	YOL087C	3351 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	ABP140	YOR239W	1887 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	YEL043W	YEL043W	2871 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	IOC2	YLR095C	2439 nt		4.02	□□□□□ -1.77
TY1A-H	P0C2I4	YDR182W-A	YDR182W-A	204 nt		4.01	□□□□□ -1.77
TY1A-H	P0C2I4	YDR246W-A	YDR246W-A	201 nt		4.01	□□□□□ -1.77
TY1A-H	P0C2I4	LSO2	YGR169C-A	279 nt		4.01	□□□□□ -1.77
TY1A-H	P0C2I4	YPR014C	YPR014C	330 nt		4.01	□□□□□ -1.77
TY1A-H	P0C2I4	VID27	YNL212W	2349 nt		4.01	□□□□□ -1.77
TY1A-H	P0C2I4	SKG6	YHR149C	2205 nt		4.01	□□□□□ -1.77
TY1A-H	P0C2I4	YLL066W-B	YLL066W-B	171 nt		4	□□□□□ -1.77
TY1A-H	P0C2I4	YLR282C	YLR282C	342 nt		4	□□□□□ -1.77
TY1A-H	P0C2I4	NHP6A	YPR052C	282 nt		4	□□□□□ -1.77
TY1A-H	P0C2I4	YBR230W-A	YBR230W-A	201 nt		4	□□□□□ -1.77
TY1A-H	P0C2I4	FOX2	YKR009C	2703 nt		4	□□□□□ -1.77
TY1A-H	P0C2I4	PDR5	YOR153W	4536 nt		4	□□□□□ -1.77
TY1A-H	P0C2I4	RNR1	YER070W	2667 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	SIR3	YLR442C	2937 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	CIN1	YOR349W	3045 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	GIN4	YDR507C	3429 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	YGL041C-B	YGL041C-B	183 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	RAM2	YKL019W	951 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	YBL065W	YBL065W	345 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	YOR345C	YOR345C	351 nt		3.99	□□□□□ -1.77
TY1A-H	P0C2I4	EFR3	YMR212C	2349 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	APC11	YDL008W	498 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	YDR193W	YDR193W	399 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	YOR333C	YOR333C	417 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	RPS23B	YPR132W	438 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	OM14	YBR230C	405 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	LYS2	YBR115C	4179 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	CPA2	YJR109C	3357 nt		3.98	□□□□□ -1.77
TY1A-H	P0C2I4	GAL10	YBR019C	2100 nt		3.97	□□□□□ -1.77
TY1A-H	P0C2I4	YOL097W-A	YOL097W-A	186 nt		3.97	□□□□□ -1.77
TY1A-H	P0C2I4	COG3	YER157W	2406 nt		3.97	□□□□□ -1.77
TY1A-H	P0C2I4	ELG1	YOR144C	2376 nt		3.97	□□□□□ -1.77
TY1A-H	P0C2I4	PAN3	YKL025C	2040 nt		3.97	□□□□□ -1.77
TY1A-H	P0C2I4	COY1	YKL179C	2040 nt		3.97	□□□□□ -1.77
TY1A-H	P0C2I4	SSB1	YDL229W	1842 nt		3.96	□□□□□ -1.78
TY1A-H	P0C2I4	SSB2	YNL209W	1842 nt		3.96	□□□□□ -1.78
TY1A-H	P0C2I4	YOR072W-B	YOR072W-B	162 nt		3.96	□□□□□ -1.78
TY1A-H	P0C2I4	GIS4	YML006C	2325 nt		3.95	□□□□□ -1.78
TY1A-H	P0C2I4	YCG1	YDR325W	3108 nt		3.95	□□□□□ -1.78
TY1A-H	P0C2I4	YOR073W-A	YOR073W-A	234 nt		3.95	□□□□□ -1.78
TY1A-H	P0C2I4	SEN1	YLR430W	6696 nt		3.95	□□□□□ -1.78
TY1A-H	P0C2I4	APC1	YNL172W	5247 nt		3.95	□□□□□ -1.78
TY1A-H	P0C2I4	CLN3	YAL040C	1743 nt		3.93	□□□□□ -1.78
TY1A-H	P0C2I4	DBP7	YKR024C	2229 nt		3.93	□□□□□ -1.78
TY1A-H	P0C2I4	YNL211C	YNL211C	261 nt		3.93	□□□□□ -1.78
TY1A-H	P0C2I4	VPH1	YOR270C	2523 nt		3.93	□□□□□ -1.78
TY1A-H	P0C2I4	PMC1	YGL006W	3522 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	SOK1	YDR006C	2706 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)C	tK(CUU)C	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)D1	tK(CUU)D1	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)D2	tK(CUU)D2	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)E1	tK(CUU)E1	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)E2	tK(CUU)E2	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)F	tK(CUU)F	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)G1	tK(CUU)G1	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)G2	tK(CUU)G2	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)G3	tK(CUU)G3	73 nt		3.92	□□□□□ -1.78
TY1A-H	P0C2I4	tK(CUU)I	tK(CUU)I	73 nt		3.92	□□□□□ -1.78

Retrieved 100 of 7,029 protein–RNA pairs in 93 ms