Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNRPA1P09661 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.16■■□□□ 1.78
SNRPA1P09661 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.16■■□□□ 1.78
SNRPA1P09661 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.16■■□□□ 1.78
SNRPA1P09661 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.16■■□□□ 1.78
SNRPA1P09661 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SNRPA1P09661 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
SNRPA1P09661 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNRPA1P09661 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.16■■□□□ 1.78
SNRPA1P09661 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNRPA1P09661 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.16■■□□□ 1.78
SNRPA1P09661 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.15■■□□□ 1.78
SNRPA1P09661 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.15■■□□□ 1.78
SNRPA1P09661 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.15■■□□□ 1.78
SNRPA1P09661 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
SNRPA1P09661 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SNRPA1P09661 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.15■■□□□ 1.78
SNRPA1P09661 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRPA1P09661 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
SNRPA1P09661 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.14■■□□□ 1.78
SNRPA1P09661 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNRPA1P09661 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNRPA1P09661 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNRPA1P09661 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SNRPA1P09661 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SNRPA1P09661 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNRPA1P09661 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SNRPA1P09661 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNRPA1P09661 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
SNRPA1P09661 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.14■■□□□ 1.78
SNRPA1P09661 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.14■■□□□ 1.78
SNRPA1P09661 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNRPA1P09661 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.14■■□□□ 1.78
SNRPA1P09661 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.14■■□□□ 1.78
SNRPA1P09661 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNRPA1P09661 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
SNRPA1P09661 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SNRPA1P09661 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
SNRPA1P09661 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
SNRPA1P09661 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
SNRPA1P09661 MIR718-201ENST00000390190 70 ntBASIC26.13■■□□□ 1.77
SNRPA1P09661 AL390719.1-204ENST00000412397 1219 ntBASIC26.13■■□□□ 1.77
SNRPA1P09661 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.13■■□□□ 1.77
SNRPA1P09661 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.13■■□□□ 1.77
SNRPA1P09661 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.13■■□□□ 1.77
SNRPA1P09661 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.13■■□□□ 1.77
SNRPA1P09661 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.13■■□□□ 1.77
SNRPA1P09661 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.13■■□□□ 1.77
SNRPA1P09661 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRPA1P09661 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRPA1P09661 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.12■■□□□ 1.77
SNRPA1P09661 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNRPA1P09661 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRPA1P09661 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.12■■□□□ 1.77
SNRPA1P09661 Z99916.2-201ENST00000604037 246 ntBASIC26.12■■□□□ 1.77
SNRPA1P09661 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.12■■□□□ 1.77
SNRPA1P09661 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNRPA1P09661 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRPA1P09661 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.12■■□□□ 1.77
SNRPA1P09661 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.12■■□□□ 1.77
SNRPA1P09661 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.11■■□□□ 1.77
SNRPA1P09661 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
SNRPA1P09661 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.11■■□□□ 1.77
SNRPA1P09661 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SNRPA1P09661 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 AL024507.2-201ENST00000606070 2574 ntBASIC26.11■■□□□ 1.77
SNRPA1P09661 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SNRPA1P09661 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
SNRPA1P09661 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRPA1P09661 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.11■■□□□ 1.77
SNRPA1P09661 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
SNRPA1P09661 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
SNRPA1P09661 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.1■■□□□ 1.77
SNRPA1P09661 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms