Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.76■■□□□ 1.55
COL1A1P02452 AL049796.1-201ENST00000565336 1766 ntBASIC24.76■■□□□ 1.55
COL1A1P02452 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL1A1P02452 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.75■■□□□ 1.55
COL1A1P02452 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
COL1A1P02452 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL1A1P02452 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL1A1P02452 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL1A1P02452 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
COL1A1P02452 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.75■■□□□ 1.55
COL1A1P02452 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.75■■□□□ 1.55
COL1A1P02452 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL1A1P02452 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL1A1P02452 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.75■■□□□ 1.55
COL1A1P02452 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.75■■□□□ 1.55
COL1A1P02452 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL1A1P02452 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
COL1A1P02452 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL1A1P02452 FEM1AP4-201ENST00000443167 1987 ntBASIC24.74■■□□□ 1.55
COL1A1P02452 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.74■■□□□ 1.55
COL1A1P02452 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
COL1A1P02452 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
COL1A1P02452 RN7SL471P-201ENST00000580476 299 ntBASIC24.74■■□□□ 1.55
COL1A1P02452 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.74■■□□□ 1.55
COL1A1P02452 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL1A1P02452 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.74■■□□□ 1.55
COL1A1P02452 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL1A1P02452 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
COL1A1P02452 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL1A1P02452 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL1A1P02452 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL1A1P02452 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL1A1P02452 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL1A1P02452 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.73■■□□□ 1.55
COL1A1P02452 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.73■■□□□ 1.55
COL1A1P02452 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.73■■□□□ 1.55
COL1A1P02452 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.73■■□□□ 1.55
COL1A1P02452 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.73■■□□□ 1.55
COL1A1P02452 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL1A1P02452 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
COL1A1P02452 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
COL1A1P02452 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 PGM5P4-201ENST00000421970 445 ntBASIC24.72■■□□□ 1.55
COL1A1P02452 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 AF106564.1-201ENST00000607058 2553 ntBASIC24.72■■□□□ 1.55
COL1A1P02452 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 AC027702.1-201ENST00000563810 1770 ntBASIC24.72■■□□□ 1.55
COL1A1P02452 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
COL1A1P02452 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL1A1P02452 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A1P02452 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.71■■□□□ 1.55
COL1A1P02452 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A1P02452 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A1P02452 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
COL1A1P02452 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A1P02452 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.71■■□□□ 1.55
COL1A1P02452 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
COL1A1P02452 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.71■■□□□ 1.55
COL1A1P02452 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A1P02452 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
COL1A1P02452 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A1P02452 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
COL1A1P02452 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.7■■□□□ 1.55
COL1A1P02452 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
COL1A1P02452 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.7■■□□□ 1.55
COL1A1P02452 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.7■■□□□ 1.55
COL1A1P02452 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.55
COL1A1P02452 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.7■■□□□ 1.55
COL1A1P02452 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A1P02452 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.7■■□□□ 1.54
COL1A1P02452 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.7■■□□□ 1.54
COL1A1P02452 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms