Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.27■□□□□ 0.51
UBL3O95164 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBL3O95164 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.26■□□□□ 0.51
UBL3O95164 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.26■□□□□ 0.51
UBL3O95164 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBL3O95164 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL3O95164 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.26■□□□□ 0.51
UBL3O95164 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL3O95164 AFG3L1P-217ENST00000557444 2447 ntBASIC18.25■□□□□ 0.51
UBL3O95164 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UBL3O95164 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.25■□□□□ 0.51
UBL3O95164 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
UBL3O95164 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.25■□□□□ 0.51
UBL3O95164 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.25■□□□□ 0.51
UBL3O95164 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
UBL3O95164 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.25■□□□□ 0.51
UBL3O95164 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UBL3O95164 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
UBL3O95164 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.25■□□□□ 0.51
UBL3O95164 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.25■□□□□ 0.51
UBL3O95164 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.25■□□□□ 0.51
UBL3O95164 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.25■□□□□ 0.51
UBL3O95164 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.25■□□□□ 0.51
UBL3O95164 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL3O95164 AC006128.1-201ENST00000624704 1661 ntBASIC18.25■□□□□ 0.51
UBL3O95164 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.24■□□□□ 0.51
UBL3O95164 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.24■□□□□ 0.51
UBL3O95164 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.24■□□□□ 0.51
UBL3O95164 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UBL3O95164 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.24■□□□□ 0.51
UBL3O95164 AC006015.1-201ENST00000429970 570 ntBASIC18.24■□□□□ 0.51
UBL3O95164 AC245052.3-201ENST00000450182 901 ntBASIC18.24■□□□□ 0.51
UBL3O95164 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.24■□□□□ 0.51
UBL3O95164 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.24■□□□□ 0.51
UBL3O95164 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.24■□□□□ 0.51
UBL3O95164 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.24■□□□□ 0.51
UBL3O95164 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL3O95164 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL3O95164 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBL3O95164 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBL3O95164 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
UBL3O95164 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL3O95164 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL3O95164 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
UBL3O95164 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms