Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.75■■□□□ 1.39
CDKL5O76039 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.75■■□□□ 1.39
CDKL5O76039 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.75■■□□□ 1.39
CDKL5O76039 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.75■■□□□ 1.39
CDKL5O76039 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDKL5O76039 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.74■■□□□ 1.39
CDKL5O76039 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.74■■□□□ 1.39
CDKL5O76039 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDKL5O76039 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.74■■□□□ 1.39
CDKL5O76039 AC016405.3-201ENST00000607710 860 ntBASIC23.74■■□□□ 1.39
CDKL5O76039 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.74■■□□□ 1.39
CDKL5O76039 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDKL5O76039 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CDKL5O76039 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKL5O76039 KRT8P36-201ENST00000489121 1440 ntBASIC23.74■■□□□ 1.39
CDKL5O76039 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDKL5O76039 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 AC092667.1-201ENST00000434301 2586 ntBASIC23.73■■□□□ 1.39
CDKL5O76039 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.73■■□□□ 1.39
CDKL5O76039 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CDKL5O76039 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CDKL5O76039 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.73■■□□□ 1.39
CDKL5O76039 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CDKL5O76039 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.73■■□□□ 1.39
CDKL5O76039 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.73■■□□□ 1.39
CDKL5O76039 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 AC068338.2-201ENST00000563278 1430 ntBASIC23.73■■□□□ 1.39
CDKL5O76039 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.73■■□□□ 1.39
CDKL5O76039 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CDKL5O76039 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKL5O76039 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CDKL5O76039 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CDKL5O76039 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CDKL5O76039 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.72■■□□□ 1.39
CDKL5O76039 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.72■■□□□ 1.39
CDKL5O76039 AC007322.1-201ENST00000426983 750 ntBASIC23.72■■□□□ 1.39
CDKL5O76039 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.72■■□□□ 1.39
CDKL5O76039 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
CDKL5O76039 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.72■■□□□ 1.39
CDKL5O76039 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CDKL5O76039 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDKL5O76039 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.72■■□□□ 1.39
CDKL5O76039 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CDKL5O76039 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.71■■□□□ 1.39
CDKL5O76039 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.71■■□□□ 1.39
CDKL5O76039 AC087633.2-202ENST00000565166 1439 ntBASIC23.71■■□□□ 1.39
CDKL5O76039 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.71■■□□□ 1.39
CDKL5O76039 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CDKL5O76039 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 RARRES2P4-201ENST00000514074 484 ntBASIC23.71■■□□□ 1.39
CDKL5O76039 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
CDKL5O76039 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.71■■□□□ 1.39
CDKL5O76039 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDKL5O76039 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.71■■□□□ 1.39
CDKL5O76039 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDKL5O76039 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
CDKL5O76039 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.39
CDKL5O76039 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.7■■□□□ 1.39
CDKL5O76039 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDKL5O76039 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CDKL5O76039 CYP21A1P-202ENST00000354927 1481 ntBASIC23.7■■□□□ 1.38
CDKL5O76039 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDKL5O76039 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.7■■□□□ 1.38
CDKL5O76039 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDKL5O76039 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDKL5O76039 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.7■■□□□ 1.38
CDKL5O76039 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CDKL5O76039 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.7■■□□□ 1.38
CDKL5O76039 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDKL5O76039 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDKL5O76039 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.7■■□□□ 1.38
CDKL5O76039 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDKL5O76039 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms