Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.49■□□□□ 0.87
RFPL1O75677 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFPL1O75677 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFPL1O75677 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFPL1O75677 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFPL1O75677 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RFPL1O75677 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
RFPL1O75677 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.48■□□□□ 0.87
RFPL1O75677 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.48■□□□□ 0.87
RFPL1O75677 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 AC137761.2-201ENST00000561729 223 ntBASIC20.48■□□□□ 0.87
RFPL1O75677 AC145350.3-201ENST00000569033 163 ntBASIC20.48■□□□□ 0.87
RFPL1O75677 TPRG1LP1-201ENST00000598702 760 ntBASIC20.48■□□□□ 0.87
RFPL1O75677 AC080038.1-201ENST00000611274 1154 ntBASIC20.48■□□□□ 0.87
RFPL1O75677 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RFPL1O75677 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.48■□□□□ 0.87
RFPL1O75677 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.48■□□□□ 0.87
RFPL1O75677 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFPL1O75677 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RFPL1O75677 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.47■□□□□ 0.87
RFPL1O75677 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.47■□□□□ 0.87
RFPL1O75677 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.47■□□□□ 0.87
RFPL1O75677 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.47■□□□□ 0.87
RFPL1O75677 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
RFPL1O75677 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFPL1O75677 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
RFPL1O75677 AC092720.2-201ENST00000602388 1665 ntBASIC20.46■□□□□ 0.87
RFPL1O75677 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RFPL1O75677 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.46■□□□□ 0.87
RFPL1O75677 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.46■□□□□ 0.87
RFPL1O75677 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RFPL1O75677 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.46■□□□□ 0.87
RFPL1O75677 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RFPL1O75677 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.46■□□□□ 0.87
RFPL1O75677 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFPL1O75677 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFPL1O75677 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFPL1O75677 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.45■□□□□ 0.86
RFPL1O75677 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.45■□□□□ 0.86
RFPL1O75677 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFPL1O75677 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFPL1O75677 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.45■□□□□ 0.86
RFPL1O75677 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.45■□□□□ 0.86
RFPL1O75677 AC006015.1-201ENST00000429970 570 ntBASIC20.45■□□□□ 0.86
RFPL1O75677 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.45■□□□□ 0.86
RFPL1O75677 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFPL1O75677 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFPL1O75677 TCF3P1-201ENST00000423021 1937 ntBASIC20.45■□□□□ 0.86
RFPL1O75677 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RFPL1O75677 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RFPL1O75677 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.44■□□□□ 0.86
RFPL1O75677 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.44■□□□□ 0.86
RFPL1O75677 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFPL1O75677 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.44■□□□□ 0.86
RFPL1O75677 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.44■□□□□ 0.86
RFPL1O75677 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.44■□□□□ 0.86
RFPL1O75677 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RFPL1O75677 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.43■□□□□ 0.86
RFPL1O75677 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.43■□□□□ 0.86
RFPL1O75677 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.43■□□□□ 0.86
RFPL1O75677 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms