Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.42■□□□□ 0.54
ZIC3O60481 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.42■□□□□ 0.54
ZIC3O60481 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZIC3O60481 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.42■□□□□ 0.54
ZIC3O60481 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.42■□□□□ 0.54
ZIC3O60481 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.42■□□□□ 0.54
ZIC3O60481 C2orf69P4-201ENST00000565394 541 ntBASIC18.42■□□□□ 0.54
ZIC3O60481 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ZIC3O60481 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZIC3O60481 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 AL121603.2-201ENST00000557373 2117 ntBASIC18.41■□□□□ 0.54
ZIC3O60481 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.41■□□□□ 0.54
ZIC3O60481 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.41■□□□□ 0.54
ZIC3O60481 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.41■□□□□ 0.54
ZIC3O60481 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.41■□□□□ 0.54
ZIC3O60481 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.41■□□□□ 0.54
ZIC3O60481 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.41■□□□□ 0.54
ZIC3O60481 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.41■□□□□ 0.54
ZIC3O60481 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.41■□□□□ 0.54
ZIC3O60481 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.41■□□□□ 0.54
ZIC3O60481 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZIC3O60481 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZIC3O60481 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
ZIC3O60481 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.4■□□□□ 0.54
ZIC3O60481 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZIC3O60481 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.4■□□□□ 0.54
ZIC3O60481 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.4■□□□□ 0.54
ZIC3O60481 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZIC3O60481 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.4■□□□□ 0.54
ZIC3O60481 AC007225.1-201ENST00000566331 1836 ntBASIC18.39■□□□□ 0.54
ZIC3O60481 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZIC3O60481 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZIC3O60481 FP700111.2-201ENST00000619190 1892 ntBASIC18.39■□□□□ 0.54
ZIC3O60481 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZIC3O60481 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.39■□□□□ 0.53
ZIC3O60481 CLDN5-201ENST00000403084 2357 ntBASIC18.39■□□□□ 0.53
ZIC3O60481 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.39■□□□□ 0.53
ZIC3O60481 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
ZIC3O60481 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 CD99P1-205ENST00000527459 561 ntBASIC18.39■□□□□ 0.53
ZIC3O60481 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ZIC3O60481 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.39■□□□□ 0.53
ZIC3O60481 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.39■□□□□ 0.53
ZIC3O60481 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ZIC3O60481 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
ZIC3O60481 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZIC3O60481 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.38■□□□□ 0.53
ZIC3O60481 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZIC3O60481 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.38■□□□□ 0.53
ZIC3O60481 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZIC3O60481 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.38■□□□□ 0.53
ZIC3O60481 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.38■□□□□ 0.53
ZIC3O60481 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.38■□□□□ 0.53
ZIC3O60481 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
ZIC3O60481 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZIC3O60481 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZIC3O60481 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZIC3O60481 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZIC3O60481 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms