Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19■□□□□ 0.63
PRKNO60260 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19■□□□□ 0.63
PRKNO60260 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19■□□□□ 0.63
PRKNO60260 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19■□□□□ 0.63
PRKNO60260 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PRKNO60260 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19■□□□□ 0.63
PRKNO60260 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19■□□□□ 0.63
PRKNO60260 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19■□□□□ 0.63
PRKNO60260 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19■□□□□ 0.63
PRKNO60260 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRKNO60260 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PRKNO60260 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
PRKNO60260 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 AL121603.2-201ENST00000557373 2117 ntBASIC19■□□□□ 0.63
PRKNO60260 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKNO60260 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PRKNO60260 FP700111.2-201ENST00000619190 1892 ntBASIC18.99■□□□□ 0.63
PRKNO60260 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PRKNO60260 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.99■□□□□ 0.63
PRKNO60260 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 LSM12P1-201ENST00000411836 588 ntBASIC18.99■□□□□ 0.63
PRKNO60260 DUSP5P2-201ENST00000426873 1033 ntBASIC18.99■□□□□ 0.63
PRKNO60260 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.99■□□□□ 0.63
PRKNO60260 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.99■□□□□ 0.63
PRKNO60260 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.99■□□□□ 0.63
PRKNO60260 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.99■□□□□ 0.63
PRKNO60260 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKNO60260 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.99■□□□□ 0.63
PRKNO60260 AC006128.1-201ENST00000624704 1661 ntBASIC18.98■□□□□ 0.63
PRKNO60260 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.98■□□□□ 0.63
PRKNO60260 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 KRT18P68-201ENST00000392293 1000 ntBASIC18.98■□□□□ 0.63
PRKNO60260 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKNO60260 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.98■□□□□ 0.63
PRKNO60260 AC091874.3-201ENST00000512672 1195 ntBASIC18.98■□□□□ 0.63
PRKNO60260 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PRKNO60260 AC083880.1-201ENST00000608266 535 ntBASIC18.98■□□□□ 0.63
PRKNO60260 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.98■□□□□ 0.63
PRKNO60260 MYC-209ENST00000641252 345 ntBASIC18.98■□□□□ 0.63
PRKNO60260 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.98■□□□□ 0.63
PRKNO60260 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKNO60260 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKNO60260 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKNO60260 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRKNO60260 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRKNO60260 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKNO60260 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKNO60260 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKNO60260 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PRKNO60260 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKNO60260 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKNO60260 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms