Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.36■■□□□ 1.81
KCNQ3O43525 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 AC008550.1-201ENST00000511500 884 ntBASIC26.36■■□□□ 1.81
KCNQ3O43525 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.36■■□□□ 1.81
KCNQ3O43525 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.36■■□□□ 1.81
KCNQ3O43525 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.36■■□□□ 1.81
KCNQ3O43525 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.36■■□□□ 1.81
KCNQ3O43525 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.35■■□□□ 1.81
KCNQ3O43525 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
KCNQ3O43525 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.35■■□□□ 1.81
KCNQ3O43525 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.35■■□□□ 1.81
KCNQ3O43525 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
KCNQ3O43525 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.35■■□□□ 1.81
KCNQ3O43525 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.35■■□□□ 1.81
KCNQ3O43525 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.35■■□□□ 1.81
KCNQ3O43525 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNQ3O43525 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 AF106564.1-201ENST00000607058 2553 ntBASIC26.34■■□□□ 1.81
KCNQ3O43525 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.34■■□□□ 1.81
KCNQ3O43525 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 AC027702.1-201ENST00000563810 1770 ntBASIC26.34■■□□□ 1.81
KCNQ3O43525 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.34■■□□□ 1.81
KCNQ3O43525 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.34■■□□□ 1.81
KCNQ3O43525 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.34■■□□□ 1.81
KCNQ3O43525 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.34■■□□□ 1.81
KCNQ3O43525 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.34■■□□□ 1.81
KCNQ3O43525 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.34■■□□□ 1.81
KCNQ3O43525 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KCNQ3O43525 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
KCNQ3O43525 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
KCNQ3O43525 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.33■■□□□ 1.81
KCNQ3O43525 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
KCNQ3O43525 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.33■■□□□ 1.81
KCNQ3O43525 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
KCNQ3O43525 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.33■■□□□ 1.81
KCNQ3O43525 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
KCNQ3O43525 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.33■■□□□ 1.81
KCNQ3O43525 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNQ3O43525 AL049796.1-201ENST00000565336 1766 ntBASIC26.33■■□□□ 1.8
KCNQ3O43525 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
KCNQ3O43525 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.32■■□□□ 1.8
KCNQ3O43525 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
KCNQ3O43525 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNQ3O43525 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNQ3O43525 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
KCNQ3O43525 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
KCNQ3O43525 UBE2SP1-201ENST00000450587 669 ntBASIC26.32■■□□□ 1.8
KCNQ3O43525 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNQ3O43525 AC005829.2-201ENST00000571422 1056 ntBASIC26.32■■□□□ 1.8
KCNQ3O43525 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNQ3O43525 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNQ3O43525 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNQ3O43525 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNQ3O43525 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNQ3O43525 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.31■■□□□ 1.8
KCNQ3O43525 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
KCNQ3O43525 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
KCNQ3O43525 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.31■■□□□ 1.8
KCNQ3O43525 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.31■■□□□ 1.8
KCNQ3O43525 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
KCNQ3O43525 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 Z99916.2-201ENST00000604037 246 ntBASIC26.31■■□□□ 1.8
KCNQ3O43525 AC120498.8-201ENST00000614275 531 ntBASIC26.31■■□□□ 1.8
KCNQ3O43525 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
KCNQ3O43525 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 FEM1AP4-201ENST00000443167 1987 ntBASIC26.31■■□□□ 1.8
KCNQ3O43525 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNQ3O43525 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms