Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PHF1O43189 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 PRORSD1P-201ENST00000295112 541 ntBASIC17.57■□□□□ 0.4
PHF1O43189 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
PHF1O43189 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 AC073210.2-201ENST00000430369 194 ntBASIC17.57■□□□□ 0.4
PHF1O43189 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PHF1O43189 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 DUX4L16-201ENST00000555130 1264 ntBASIC17.57■□□□□ 0.4
PHF1O43189 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.57■□□□□ 0.4
PHF1O43189 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.57■□□□□ 0.4
PHF1O43189 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 AC053503.5-201ENST00000601508 636 ntBASIC17.57■□□□□ 0.4
PHF1O43189 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHF1O43189 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
PHF1O43189 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.57■□□□□ 0.4
PHF1O43189 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.57■□□□□ 0.4
PHF1O43189 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PHF1O43189 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.56■□□□□ 0.4
PHF1O43189 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 RPS2P52-201ENST00000469610 820 ntBASIC17.56■□□□□ 0.4
PHF1O43189 RNA5SP413-201ENST00000516373 109 ntBASIC17.56■□□□□ 0.4
PHF1O43189 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.56■□□□□ 0.4
PHF1O43189 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHF1O43189 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PHF1O43189 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.56■□□□□ 0.4
PHF1O43189 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.56■□□□□ 0.4
PHF1O43189 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.56■□□□□ 0.4
PHF1O43189 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHF1O43189 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHF1O43189 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.55■□□□□ 0.4
PHF1O43189 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHF1O43189 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PHF1O43189 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.55■□□□□ 0.4
PHF1O43189 AF201337.1-201ENST00000520239 748 ntBASIC17.55■□□□□ 0.4
PHF1O43189 AC098934.4-201ENST00000564127 592 ntBASIC17.55■□□□□ 0.4
PHF1O43189 MYCNOS-205ENST00000641950 531 ntBASIC17.55■□□□□ 0.4
PHF1O43189 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.55■□□□□ 0.4
PHF1O43189 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PHF1O43189 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHF1O43189 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.54■□□□□ 0.4
PHF1O43189 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
PHF1O43189 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PHF1O43189 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.54■□□□□ 0.4
PHF1O43189 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.54■□□□□ 0.4
PHF1O43189 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.54■□□□□ 0.4
PHF1O43189 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.54■□□□□ 0.4
PHF1O43189 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PHF1O43189 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 AL121603.2-201ENST00000557373 2117 ntBASIC17.54■□□□□ 0.4
PHF1O43189 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHF1O43189 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PHF1O43189 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PHF1O43189 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms